RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, human

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFC-208	ENST00000512711	OR1N1	Q8NGS0	311 aa		2.57	□□□□□ -2
PDGFC-208	ENST00000512711	IPO4	Q8TEX9	1081 aa	Known RBP	2.57	□□□□□ -2
PDGFC-208	ENST00000512711	LPAR1	Q92633	364 aa		2.57	□□□□□ -2
PDGFC-208	ENST00000512711	SFXN1	Q9H9B4	322 aa		2.57	□□□□□ -2
PDGFC-208	ENST00000512711	TRPC5	Q9UL62	973 aa	Predicted RBP	2.57	□□□□□ -2
PDGFC-208	ENST00000512711	UBE2J1	Q9Y385	318 aa	Predicted RBP	2.57	□□□□□ -2
PDGFC-208	ENST00000512711	PCDHGB2	Q9Y5G2	931 aa		2.57	□□□□□ -2
PDGFC-208	ENST00000512711	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	2.57	□□□□□ -2
PDGFC-208	ENST00000512711	CLEC18A	A5D8T8	446 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	RGS14	O43566	566 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	DNPH1	O43598	174 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	PLA2G6	O60733	806 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	PAPSS2	O95340	614 aa	Predicted RBP	2.56	□□□□□ -2
PDGFC-208	ENST00000512711	LCAT	P04180	440 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	CYP3A4	P08684	503 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	TRIM27	P14373	513 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	CPA1	P15085	419 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	PCYT1A	P49585	367 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	DSCR9	P59020	149 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	TAS2R50	P59544	299 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711		Q0VFX4	171 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	GPS2	Q13227	327 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	CBFB	Q13951	182 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	KEAP1	Q14145	624 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	MPEG1	Q2M385	716 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	ARL13A	Q5H913	290 aa	Predicted RBP	2.56	□□□□□ -2
PDGFC-208	ENST00000512711	TTC39A	Q5SRH9	613 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	C10orf76	Q5T2E6	689 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	KRTAP5-1	Q6L8H4	278 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	FBXO38	Q6PIJ6	1188 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	PARM1	Q6UWI2	310 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	KIAA1324	Q6UXG2	1013 aa	Known RBP	2.56	□□□□□ -2
PDGFC-208	ENST00000512711	USP43	Q70EL4	1123 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	CYB5R4	Q7L1T6	521 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	KDELC2	Q7Z4H8	507 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	TMEM217	Q8N7C4	229 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	CLEC18C	Q8NCF0	446 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	ADAMTS14	Q8WXS8	1223 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	PMM1	Q92871	262 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	KIAA1191	Q96A73	305 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	ZNF419	Q96HQ0	510 aa	Predicted RBP	2.56	□□□□□ -2
PDGFC-208	ENST00000512711	MED30	Q96HR3	178 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	CLMN	Q96JQ2	1002 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	FAM84B	Q96KN1	310 aa	Predicted RBP	2.56	□□□□□ -2
PDGFC-208	ENST00000512711	MEIS3	Q99687	375 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	WDR77	Q9BQA1	342 aa	Predicted RBP	2.56	□□□□□ -2
PDGFC-208	ENST00000512711	SORBS1	Q9BX66	1292 aa	Known RBP	2.56	□□□□□ -2
PDGFC-208	ENST00000512711	FRMD8	Q9BZ67	464 aa	Predicted RBP	2.56	□□□□□ -2
PDGFC-208	ENST00000512711	CCDC134	Q9H6E4	229 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	PLAC1	Q9HBJ0	212 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	TBC1D14	Q9P2M4	693 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	PLEKHB1	Q9UF11	243 aa	Predicted RBP	2.56	□□□□□ -2
PDGFC-208	ENST00000512711	SLC8A2	Q9UPR5	921 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	ICK	Q9UPZ9	632 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	ZBTB1	Q9Y2K1	713 aa		2.56	□□□□□ -2
PDGFC-208	ENST00000512711	CYP3A7-CYP3A51P	A0A087WV96	503 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	TCRBV7S3A2	A0A539	114 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	TGFB3	P10600	412 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	CYP3A7	P24462	503 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	ADPRH	P54922	357 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	SELENOV	P59797	346 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	HYAL1	Q12794	435 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	LONRF1	Q17RB8	773 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	PRAMEF19	Q5SWL8	479 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	IZUMO3	Q5VZ72	239 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	CAPRIN2	Q6IMN6	1127 aa	Known RBP	2.55	□□□□□ -2
PDGFC-208	ENST00000512711	RINT1	Q6NUQ1	792 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	PRSS57	Q6UWY2	283 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	DPP9	Q86TI2	863 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	TRABD2A	Q86V40	505 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	TTC30A	Q86WT1	665 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	SKAP1	Q86WV1	359 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	KDM1B	Q8NB78	822 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	CMAS	Q8NFW8	434 aa	Predicted RBP	2.55	□□□□□ -2
PDGFC-208	ENST00000512711	FAM110D	Q8TAY7	271 aa	Predicted RBP	2.55	□□□□□ -2
PDGFC-208	ENST00000512711	WFIKKN2	Q8TEU8	576 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	FAR2	Q96K12	515 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	SLITRK1	Q96PX8	696 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	SF3B5	Q9BWJ5	86 aa	Known RBP	2.55	□□□□□ -2
PDGFC-208	ENST00000512711	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	2.55	□□□□□ -2
PDGFC-208	ENST00000512711	NECTIN3	Q9NQS3	549 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	HELLS	Q9NRZ9	838 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	SLC52A1	Q9NWF4	448 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	NCKIPSD	Q9NZQ3	722 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	MDFIC	Q9P1T7	246 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	CHPF2	Q9P2E5	772 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	SLC39A10	Q9ULF5	831 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	CA14	Q9ULX7	337 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	MAGED2	Q9UNF1	606 aa	Predicted RBP	2.55	□□□□□ -2
PDGFC-208	ENST00000512711	LZTS1	Q9Y250	596 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711	DTX4	Q9Y2E6	619 aa		2.55	□□□□□ -2
PDGFC-208	ENST00000512711		A0A087WYN8	130 aa		2.54	□□□□□ -2
PDGFC-208	ENST00000512711	TRBV5-7	A0A0A0MS05	114 aa		2.54	□□□□□ -2
PDGFC-208	ENST00000512711	OR6C75	A6NL08	312 aa		2.54	□□□□□ -2
PDGFC-208	ENST00000512711	AQP12B	A6NM10	295 aa		2.54	□□□□□ -2
PDGFC-208	ENST00000512711	KCNJ18	B7U540	433 aa		2.54	□□□□□ -2
PDGFC-208	ENST00000512711	RASA4B	C9J798	803 aa		2.54	□□□□□ -2
PDGFC-208	ENST00000512711	MSI1	O43347	362 aa	Known RBP	2.54	□□□□□ -2
PDGFC-208	ENST00000512711	RASA4	O43374	803 aa		2.54	□□□□□ -2
PDGFC-208	ENST00000512711	PPP1R3D	O95685	299 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms