RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 H2AFXP16104 143 aaPredicted RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 CTCFP49711 727 aaPredicted RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 SERPINH1P50454 418 aaKnown RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 SLC39A12Q504Y0 691 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 PMF1Q6P1K2 205 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 FBXO42Q6P3S6 717 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 FAM220AQ7Z4H9 259 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 KRT73Q86Y46 540 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 OR10G6Q8NH81 332 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 MYOCQ99972 504 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 EPS8L2Q9H6S3 715 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 CCDC177Q9NQR7 707 aaPredicted RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 PIK3CDO00329 1044 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 TRIM66O15016 1216 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 TPD52L2O43399 206 aaKnown RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 SH3BGRLO75368 114 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 MYL12AP19105 171 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 MASP1P48740 699 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 PSEN2P49810 448 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 TUBP50607 506 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 HERVK_113P62684 666 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 PTSQ03393 145 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 RGS1Q08116 209 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 MTAPQ13126 283 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 MKRN4PQ13434 485 aaPredicted RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 CCNIQ14094 377 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 FBXO38Q6PIJ6 1188 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 C15orf52Q6ZUT6 534 aaKnown RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 KRT74Q7RTS7 529 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 FAM228AQ86W67 206 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 ZNF671Q8TAW3 534 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 SMARCD1Q96GM5 515 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 NAT9Q9BTE0 207 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 TTLL2Q9BWV7 592 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 MANSC1Q9H8J5 431 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 UBA2Q9UBT2 640 aaPredicted RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 MORC2Q9Y6X9 1032 aaPredicted RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 CXCL11O14625 94 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 TSC22D2O75157 780 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 RPA1P27694 616 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 RPL21P46778 160 aaKnown RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 RAD23AP54725 363 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 SNRPD1P62314 119 aaKnown RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 KRR1Q13601 381 aaKnown RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 CBWD6Q4V339 395 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 OR8H2Q8N162 312 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 ZNF786Q8N393 782 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 METTL21AQ8WXB1 218 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 TPD52L3Q96J77 140 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 ADAM2Q99965 735 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 MKNK1Q9BUB5 465 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 C2orf49Q9BVC5 232 aaPredicted RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 FAIM2Q9BWQ8 316 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 PDGFDQ9GZP0 370 aaPredicted RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 ELOVL4Q9GZR5 314 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 TLE6Q9H808 572 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 MCCC2Q9HCC0 563 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 GPATCH2LQ9NWQ4 482 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 RRN3Q9NYV6 651 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 MARK1Q9P0L2 795 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 ZNF624Q9P2J8 865 aaPredicted RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 SPEF2Q9C093 1822 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 H3BNH8 94 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 CACNB4O00305 520 aaPredicted RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 TRIM24O15164 1050 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 ADCY6O43306 1168 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 SEC22BO75396 215 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 KELP23276 732 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 PSMD4P55036 377 aaKnown RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 SLC22A9Q8IVM8 553 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 RUBCNQ92622 972 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 EFCAB1Q9HAE3 211 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 CYLDQ9NQC7 956 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 UBP1Q9NZI7 540 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 COPG2Q9UBF2 871 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 ENOPH1Q9UHY7 261 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 ACOT9Q9Y305 439 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 BAIAP3O94812 1187 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 TFPIP10646 304 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 INSRRP14616 1297 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 HDCP19113 662 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 RPL4P36578 427 aaKnown RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 ARHGDIBP52566 201 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 COPAP53621 1224 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 TEAD4Q15561 434 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 POM121L1PQ3SYA9 428 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 METTL7BQ6UX53 244 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 STRA8Q7Z7C7 330 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 ADSSL1Q8N142 457 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 STARD8Q92502 1023 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 UBE2E3Q969T4 207 aa5.89□□□□□ -1.47
USP38-203ENST00000511739 CELF6Q96J87 481 aaKnown RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 MRPS33Q9Y291 106 aaKnown RBP5.89□□□□□ -1.47
USP38-203ENST00000511739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.89□□□□□ -1.47
USP38-203ENST00000511739 TBC1D3DA0A087WVF3 549 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TBC1D3IA0A087WXS9 549 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TBC1D3EA0A087X179 549 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TBC1D3KA0A087X1G2 549 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 A0A0B4J269 797 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms