RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 ATP5C1P36542 298 aaKnown RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 GPR15P49685 360 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 USP46P62068 366 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 PITX1P78337 314 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 COG7P83436 770 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 OTUD4Q01804 1114 aaKnown RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 GUCY2DQ02846 1103 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 CALCOCO2Q13137 446 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 PPP1R7Q15435 360 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 ZC3H12AQ5D1E8 599 aaKnown RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 PPP6R3Q5H9R7 873 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 PPM1LQ5SGD2 360 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 MANEALQ5VSG8 457 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 KAZNQ674X7 775 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 RFX8Q6ZV50 586 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 DGLUCYQ7Z3D6 616 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 ANKS1BQ7Z6G8 1248 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 PCGF5Q86SE9 256 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 MREGQ8N565 214 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 PQLC3Q8N755 202 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 C12orf76Q8N812 135 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 ACTL9Q8TC94 416 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 AENQ8WTP8 325 aaKnown RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 NDRG1Q92597 394 aaKnown RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 EDEM1Q92611 657 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 PLD4Q96BZ4 506 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 MSANTD3Q96H12 275 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 SNF8Q96H20 258 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 KCTD15Q96SI1 283 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 FRMD8Q9BZ67 464 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 TKTL2Q9H0I9 626 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 ARHGEF4Q9NR80 690 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 ARHGEF3Q9NR81 526 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 KLHL11Q9NVR0 708 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 GDE1Q9NZC3 331 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 CWC15Q9P013 229 aaKnown RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 PPARGC1AQ9UBK2 798 aaKnown RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 OR12D3Q9UGF7 316 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 DNMT3LQ9UJW3 386 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 R3HDM2Q9Y2K5 976 aaKnown RBP9.39□□□□□ -0.91
NR1I3-228ENST00000511676 SLC27A5Q9Y2P5 690 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 PCDHGA2Q9Y5H1 932 aa9.39□□□□□ -0.91
NR1I3-228ENST00000511676 MYO10Q9HD67 2058 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 ZNF840PA6NDX5 716 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 PPP1R12AO14974 1030 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 DCLK1O15075 740 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 TGM5O43548 720 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 ZMYND10O75800 440 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 OLFM2O95897 454 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 OAS1P00973 400 aaKnown RBP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 RBP3P10745 1247 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 GLULP15104 373 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 RPL17P18621 184 aaKnown RBP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 MX2P20592 715 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 DDX6P26196 483 aaKnown RBP eCLIP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 CDC25CP30307 473 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 EPHA5P54756 1037 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 MLLT6P55198 1093 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 TBX4P57082 545 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 STARD6P59095 220 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 TPI1P60174 286 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 EIF3EP60228 445 aaKnown RBP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 RBM10P98175 930 aaKnown RBP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 ADCY2Q08462 1091 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 CBLBQ13191 982 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 PDK1Q15118 436 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 TAF12Q16514 161 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 CA9Q16790 459 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 RAB6CQ53S08 254 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 SLC45A4Q5BKX6 768 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 C10orf120Q5SQS8 335 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 BEND6Q5SZJ8 279 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 HECTD3Q5T447 861 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 NCBP2-AS2Q69YL0 99 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 ZNF852Q6ZMS4 543 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 ADAT2Q7Z6V5 191 aaKnown RBP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 HOOK3Q86VS8 718 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 KIAA1958Q8N8K9 716 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 C1orf54Q8WWF1 131 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 ATG4AQ8WYN0 398 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 FATE1Q969F0 183 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 RNF34Q969K3 372 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 LRRC45Q96CN5 670 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 FCRL2Q96LA5 508 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 ZNF512Q96ME7 567 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 OLFM3Q96PB7 478 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 QKIQ96PU8 341 aaKnown RBP eCLIP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 RAB6CQ9H0N0 254 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 CATSPERBQ9H7T0 1116 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 FAM86C1Q9NVL1 165 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 OSER1Q9NX31 292 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 MARCH2Q9P0N8 246 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 MTRF1LQ9UGC7 380 aaKnown RBP9.38□□□□□ -0.91
NR1I3-228ENST00000511676 DNPEPQ9ULA0 475 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 CDH7Q9ULB5 785 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 ZNF148Q9UQR1 794 aa9.38□□□□□ -0.91
NR1I3-228ENST00000511676 C5orf42Q9H799 3197 aa9.37□□□□□ -0.91
NR1I3-228ENST00000511676 MYO16Q9Y6X6 1858 aa9.37□□□□□ -0.91
NR1I3-228ENST00000511676 IGLV3-10A0A075B6K4 115 aa9.37□□□□□ -0.91
NR1I3-228ENST00000511676 KANSL1LA0AUZ9 987 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms