RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 PRAMEF19Q5SWL8 479 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 FAXCQ5TGI0 409 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 FAM90A2PQ658T7 463 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 ABLIM2Q6H8Q1 611 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 PARM1Q6UWI2 310 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 DSTYKQ6XUX3 929 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 KRT28Q7Z3Y7 464 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 RAVER1Q8IY67 606 aaKnown RBP2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 LAS2Q8IYD9 372 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 FAM9BQ8IZU0 186 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 CLASRPQ8N2M8 674 aaKnown RBP2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 CLEC18CQ8NCF0 446 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 FAM156AQ8NDB6 213 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 C7orf57Q8NEG2 295 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 CTCFLQ8NI51 663 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 OVCA2Q8WZ82 227 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 FAM210AQ96ND0 272 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 DUX5Q96PT3 197 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 WDR24Q96S15 920 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 EIF3CQ99613 913 aaKnown RBP2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 ELOVL1Q9BW60 279 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 MAF1Q9H063 256 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 TSPYL1Q9H0U9 437 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 SIRT3Q9NTG7 399 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 TMEM51Q9NW97 253 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 NOB1Q9ULX3 412 aaKnown RBP2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 LAMP3Q9UQV4 416 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 INSL5Q9Y5Q6 135 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 COMMD10Q9Y6G5 202 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 SMAD5-AS1Q9Y6J3 95 aa2.32□□□□□ -2.04
HMGB3P17-201ENST00000504195 GAGE12JA6NER3 117 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 OR6C75A6NL08 312 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 KCNQ3O43525 872 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 CBFA2T3O75081 653 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 TBX6O95947 436 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 KLKB1P03952 638 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 HRGP04196 525 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 ARP10275 920 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 PEX2P28328 305 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 CRYZQ08257 329 aaKnown RBP2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 DSC1Q08554 894 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 COASYQ13057 564 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 CBFBQ13951 182 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZRSR2Q15696 482 aaKnown RBP2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 FAM102BQ5T8I3 360 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZNF280DQ6N043 979 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 HMBOX1Q6NT76 420 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 ACSM6Q6P461 480 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 TLDC1Q6P9B6 456 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 USP17L6PQ6QN14 398 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZNF474Q6S9Z5 364 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 CLEC4GQ6UXB4 293 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 FAM83HQ6ZRV2 1179 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 CYB5R4Q7L1T6 521 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 MUC20Q8N307 709 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 GLMPQ8WWB7 406 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 INPP5DQ92835 1189 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 IQCDQ96DY2 449 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 PAIP2Q9BPZ3 127 aaKnown RBP2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 ABHD14AQ9BUJ0 271 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 C1QTNF5Q9BXJ0 243 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 SPRY4Q9C004 299 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 ISCUQ9H1K1 167 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 KRCC1Q9NPI7 259 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 SNED1Q8TER0 1413 aa2.31□□□□□ -2.04
HMGB3P17-201ENST00000504195 DOCK7Q96N67 2140 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 A0A1W2PNU3 283 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 BICDL2A1A5D9 508 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 PRR23AA6NEV1 266 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 SRRM3A6NNA2 597 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZSCAN9O15535 394 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 CREB3O43889 395 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 SH3BP5O60239 455 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 IL18RAPO95256 599 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 NFATC1O95644 943 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZBED1O96006 694 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 LDLRP01130 860 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 WNT1P04628 370 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 CYP1A2P05177 515 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 TPM2P07951 284 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 FAM200BP0CF97 657 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 SLC5A2P31639 672 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 TERF1P54274 439 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 DLX5P56178 289 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 KRTAP10-1P60331 282 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 TRAF2Q12933 501 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 P3H1Q32P28 736 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 Q5PR19 223 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 RRAGBQ5VZM2 374 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 PMS2CLQ68D20 193 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 NXNQ6DKJ4 435 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 MRNIPQ6NTE8 343 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 CCDC144NLQ6NUI1 221 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZNF449Q6P9G9 518 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 Q6ZTK2 550 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 CCAR1Q8IX12 1150 aaKnown RBP2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 CCDC150Q8NCX0 1101 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 SRFBP1Q8NEF9 429 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms