RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.57■□□□□ 0.24
CLIC4-203ENST00000489758 TYW5A2RUC4 315 aaKnown RBP16.56■□□□□ 0.24
CLIC4-203ENST00000489758 TRIM24O15164 1050 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 FGF10O15520 208 aaPredicted RBP16.56■□□□□ 0.24
CLIC4-203ENST00000489758 GLULP15104 373 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 ERCC2P18074 760 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 ARL4AP40617 200 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 EIF2DP41214 584 aaKnown RBP16.56■□□□□ 0.24
CLIC4-203ENST00000489758 CDKN2BP42772 138 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 RWDD2BP57060 319 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 FSCBQ5H9T9 825 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 TXNDC11Q6PKC3 985 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 MFSD7Q6UXD7 560 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 TFAP2DQ7Z6R9 452 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 RALGPS2Q86X27 583 aaPredicted RBP16.56■□□□□ 0.24
CLIC4-203ENST00000489758 MFN1Q8IWA4 741 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 MAP7D3Q8IWC1 876 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 RCOR2Q8IZ40 523 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 PHTF2Q8N3S3 785 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 UBL4BQ8N7F7 174 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 RTL3Q8N8U3 475 aaKnown RBP16.56■□□□□ 0.24
CLIC4-203ENST00000489758 PCDH19Q8TAB3 1148 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 FIBINQ8TAL6 211 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 RNF25Q96BH1 459 aaPredicted RBP16.56■□□□□ 0.24
CLIC4-203ENST00000489758 CALN1Q9BXU9 219 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 SLC2A11Q9BYW1 496 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 KLC2Q9H0B6 622 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 EPHX3Q9H6B9 360 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 NDFIP2Q9NV92 336 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 DNAJC17Q9NVM6 304 aaKnown RBP16.56■□□□□ 0.24
CLIC4-203ENST00000489758 WNT16Q9UBV4 365 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 TBC1D30Q9Y2I9 924 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 MFHAS1Q9Y4C4 1052 aa16.56■□□□□ 0.24
CLIC4-203ENST00000489758 KRBA1A5PL33 1030 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 DCLK1O15075 740 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 ZRANB2O95218 330 aaKnown RBP eCLIP16.55■□□□□ 0.24
CLIC4-203ENST00000489758 PYGMP11217 842 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 AMPD1P23109 780 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 HLA-FP30511 346 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 ZXDAP98168 799 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 MLF2Q15773 248 aaPredicted RBP16.55■□□□□ 0.24
CLIC4-203ENST00000489758 ANKRD20A8PQ5CZ79 823 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 ZFYVE27Q5T4F4 411 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 SPOCD1Q6ZMY3 1216 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 KIAA0907Q7Z7F0 614 aaPredicted RBP16.55■□□□□ 0.24
CLIC4-203ENST00000489758 CARNMT1Q8N4J0 409 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 PQLC3Q8N755 202 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.55■□□□□ 0.24
CLIC4-203ENST00000489758 MSANTD3Q96H12 275 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 RNF157Q96PX1 679 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 XPO6Q96QU8 1125 aaKnown RBP16.55■□□□□ 0.24
CLIC4-203ENST00000489758 WDR24Q96S15 920 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 CATSPERBQ9H7T0 1116 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 FBRSL1Q9HCM7 1045 aaKnown RBP16.55■□□□□ 0.24
CLIC4-203ENST00000489758 ARHGEF3Q9NR81 526 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 ETNK2Q9NVF9 386 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 CA14Q9ULX7 337 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 SLC27A6Q9Y2P4 619 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 JRKLQ9Y4A0 524 aa16.55■□□□□ 0.24
CLIC4-203ENST00000489758 TTC28Q96AY4 2481 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.54■□□□□ 0.24
CLIC4-203ENST00000489758 H0Y626 953 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 FANCGO15287 622 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 CD70P32970 193 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 MAPKAPK2P49137 400 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 DNA2P51530 1060 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 GNG11P61952 73 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 LMAN2Q12907 356 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 ZNF177Q13360 481 aaPredicted RBP16.54■□□□□ 0.24
CLIC4-203ENST00000489758 CDH18Q13634 790 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 RPS6KA1Q15418 735 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 AFMIDQ63HM1 303 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 AADACL2Q6P093 401 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 TPRG1Q6ZUI0 275 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 NPWQ8N729 165 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 ZNF557Q8N988 423 aaPredicted RBP16.54■□□□□ 0.24
CLIC4-203ENST00000489758 ALG14Q96F25 216 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 RBM41Q96IZ5 413 aaKnown RBP16.54■□□□□ 0.24
CLIC4-203ENST00000489758 HERPUD2Q9BSE4 406 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 NOL6Q9H6R4 1146 aaKnown RBP16.54■□□□□ 0.24
CLIC4-203ENST00000489758 DEC1Q9P2X7 70 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 OR51B4Q9Y5P0 310 aa16.54■□□□□ 0.24
CLIC4-203ENST00000489758 hCG_1818297A0A087WSY0 165 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.53■□□□□ 0.24
CLIC4-203ENST00000489758 ENC1O14682 589 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 DAPK3O43293 454 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 OR1E1P30953 314 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 PTPN7P35236 360 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 DEKP35659 375 aaKnown RBP16.53■□□□□ 0.24
CLIC4-203ENST00000489758 DGKGP49619 791 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 GALK1P51570 392 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 COPS2P61201 443 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 AMPD2Q01433 879 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 PRKCQQ04759 706 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 ZNF211Q13398 564 aaPredicted RBP16.53■□□□□ 0.24
CLIC4-203ENST00000489758 TMEM31Q5JXX7 168 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 NCBP2-AS2Q69YL0 99 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 SLC9A4Q6AI14 798 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 GRAMD4Q6IC98 578 aa16.53■□□□□ 0.24
CLIC4-203ENST00000489758 NYAP1Q6ZVC0 841 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms