RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 EPS8L2Q9H6S3 715 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 SLC52A1Q9NWF4 448 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 WNT16Q9UBV4 365 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 CKAP5Q14008 2032 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 CXorf65A6NEN9 183 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 C3orf70A6NLC5 250 aaPredicted RBP3.45□□□□□ -1.86
CPSF3-205ENST00000489629 INAFM1C9JVW0 142 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 ACOT8O14734 319 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 HNRNPDLO14979 420 aaKnown RBP3.45□□□□□ -1.86
CPSF3-205ENST00000489629 ALDOAP04075 364 aaKnown RBP3.45□□□□□ -1.86
CPSF3-205ENST00000489629 LCKP06239 509 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 ACAA1P09110 424 aaPredicted RBP3.45□□□□□ -1.86
CPSF3-205ENST00000489629 HOXC6P09630 235 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 FGF3P11487 239 aaPredicted RBP3.45□□□□□ -1.86
CPSF3-205ENST00000489629 PEPDP12955 493 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 ADPRHP54922 357 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 FAM3BP58499 235 aaPredicted RBP3.45□□□□□ -1.86
CPSF3-205ENST00000489629 ROR2Q01974 943 aaKnown RBP3.45□□□□□ -1.86
CPSF3-205ENST00000489629 Q0VFX4 171 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 MPEG1Q2M385 716 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 CAPRIN2Q6IMN6 1127 aaKnown RBP3.45□□□□□ -1.86
CPSF3-205ENST00000489629 TMEM88Q6PEY1 159 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 FBXO38Q6PIJ6 1188 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.45□□□□□ -1.86
CPSF3-205ENST00000489629 PRR26Q8N8Z3 221 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 KDM1BQ8NB78 822 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 PJA1Q8NG27 643 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 IP6K1Q92551 441 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 PHF21BQ96EK2 531 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 PPP1R10Q96QC0 940 aaKnown RBP3.45□□□□□ -1.86
CPSF3-205ENST00000489629 OSBPL5Q9H0X9 879 aaPredicted RBP3.45□□□□□ -1.86
CPSF3-205ENST00000489629 METTL14Q9HCE5 456 aaKnown RBP3.45□□□□□ -1.86
CPSF3-205ENST00000489629 TBC1D14Q9P2M4 693 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 MYO6Q9UM54 1294 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 ZBTB1Q9Y2K1 713 aa3.45□□□□□ -1.86
CPSF3-205ENST00000489629 BECN2A8MW95 431 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 RASA4BC9J798 803 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 RASA4O43374 803 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 RGS14O43566 566 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 KRT86O43790 486 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 PLA2G6O60733 806 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 RPP40O75818 363 aaKnown RBP3.44□□□□□ -1.86
CPSF3-205ENST00000489629 LCATP04180 440 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 ARSBP15848 533 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 NPPBP16860 134 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 MT3P25713 68 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 RFX5P48382 616 aaPredicted RBP3.44□□□□□ -1.86
CPSF3-205ENST00000489629 HSPA7P48741 367 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 DSCR9P59020 149 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 PMPCAQ10713 525 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 HYAL1Q12794 435 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 TRAF1Q13077 416 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 GPS2Q13227 327 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 KRT81Q14533 505 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 NFATC4Q14934 902 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 C10orf76Q5T2E6 689 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 IZUMO3Q5VZ72 239 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 ANKRD40Q6AI12 368 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 SLC16A12Q6ZSM3 486 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 ENGASEQ8NFI3 743 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 C18orf8Q96DM3 657 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 C8orf48Q96LL4 319 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 ADAD1Q96M93 576 aaKnown RBP3.44□□□□□ -1.86
CPSF3-205ENST00000489629 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.44□□□□□ -1.86
CPSF3-205ENST00000489629 DCLK3Q9C098 648 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 ZNF304Q9HCX3 659 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 KRCC1Q9NPI7 259 aaPredicted RBP3.44□□□□□ -1.86
CPSF3-205ENST00000489629 HIF1ANQ9NWT6 349 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 IGSF9Q9P2J2 1179 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 RAB21Q9UL25 225 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 SLC12A4Q9UP95 1085 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 TNFSF13BQ9Y275 285 aa3.44□□□□□ -1.86
CPSF3-205ENST00000489629 A0A1B0GVT2 93 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 MCIDASD6RGH6 385 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 MSI1O43347 362 aaKnown RBP3.43□□□□□ -1.86
CPSF3-205ENST00000489629 SPRY3O43610 288 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 MYL3P08590 195 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 CPA1P15085 419 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 KLRK1P26718 216 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 POLE2P56282 527 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 SELENOVP59797 346 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 ABATP80404 500 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 CRYZQ08257 329 aaKnown RBP3.43□□□□□ -1.86
CPSF3-205ENST00000489629 NADSYN1Q6IA69 706 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 ERAP2Q6P179 960 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 Q6ZTK2 550 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 OR2C3Q8N628 320 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 GABPB2Q8TAK5 448 aaPredicted RBP3.43□□□□□ -1.86
CPSF3-205ENST00000489629 IPO4Q8TEX9 1081 aaKnown RBP3.43□□□□□ -1.86
CPSF3-205ENST00000489629 REXO5Q96IC2 774 aaKnown RBP3.43□□□□□ -1.86
CPSF3-205ENST00000489629 WDR77Q9BQA1 342 aaPredicted RBP3.43□□□□□ -1.86
CPSF3-205ENST00000489629 STK33Q9BYT3 514 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 PNRC2Q9NPJ4 139 aaKnown RBP3.43□□□□□ -1.86
CPSF3-205ENST00000489629 RNF146Q9NTX7 359 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 TRPC5Q9UL62 973 aaPredicted RBP3.43□□□□□ -1.86
CPSF3-205ENST00000489629 DTX4Q9Y2E6 619 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 PTGDR2Q9Y5Y4 395 aa3.43□□□□□ -1.86
CPSF3-205ENST00000489629 TRBV5-7A0A0A0MS05 114 aa3.42□□□□□ -1.86
CPSF3-205ENST00000489629 ANO9A1A5B4 782 aa3.42□□□□□ -1.86
CPSF3-205ENST00000489629 OR6C75A6NL08 312 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms