RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 GBE1Q04446 702 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 XRCC4Q13426 336 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 MPPE1Q53F39 396 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 TANGO2Q6ICL3 276 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 NPNTQ6UXI9 565 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 BZW1Q7L1Q6 419 aaKnown RBP16.47■□□□□ 0.23
CLDN11-208ENST00000488989 OTOP3Q7RTS5 596 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 ARHGAP12Q8IWW6 846 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 UMODL1-AS1Q8N2C9 162 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 MMGT1Q8N4V1 131 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 NPWQ8N729 165 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 TDRD5Q8NAT2 981 aaKnown RBP16.47■□□□□ 0.23
CLDN11-208ENST00000488989 OSCP1Q8WVF1 389 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 HLA-CQ95604 372 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 NKD2Q969F2 451 aaPredicted RBP16.47■□□□□ 0.23
CLDN11-208ENST00000488989 ELSPBP1Q96BH3 223 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 TMA16Q96EY4 203 aaKnown RBP16.47■□□□□ 0.23
CLDN11-208ENST00000488989 NDFIP2Q9NV92 336 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 TRDMT1O14717 391 aaKnown RBP16.46■□□□□ 0.23
CLDN11-208ENST00000488989 SCAMP3O14828 347 aaKnown RBP16.46■□□□□ 0.23
CLDN11-208ENST00000488989 CHRNA3P32297 505 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 NDST2P52849 883 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 C2orf54Q08AI8 447 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 FCHO2Q0JRZ9 810 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 OASLQ15646 514 aaKnown RBP16.46■□□□□ 0.23
CLDN11-208ENST00000488989 LEXMQ3ZCV2 418 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 C1orf228Q6PIY5 440 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 VITQ6UXI7 678 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 MFSD6LQ8IWD5 586 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 ADGRG2Q8IZP9 1017 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 CFAP52Q8N1V2 620 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 C1orf54Q8WWF1 131 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 MAGOHBQ96A72 148 aaKnown RBP16.46■□□□□ 0.23
CLDN11-208ENST00000488989 HAUS1Q96CS2 278 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 P2RY11Q96G91 374 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 LINC00597Q9H2U6 94 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 NOL6Q9H6R4 1146 aaKnown RBP16.46■□□□□ 0.23
CLDN11-208ENST00000488989 MARK1Q9P0L2 795 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 SAE1Q9UBE0 346 aaPredicted RBP16.46■□□□□ 0.23
CLDN11-208ENST00000488989 PCYOX1Q9UHG3 505 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 DRG1Q9Y295 367 aaKnown RBP16.46■□□□□ 0.23
CLDN11-208ENST00000488989 TBC1D30Q9Y2I9 924 aa16.46■□□□□ 0.23
CLDN11-208ENST00000488989 SPTBN5Q9NRC6 3674 aaKnown RBP16.46■□□□□ 0.23
CLDN11-208ENST00000488989 TYW5A2RUC4 315 aaKnown RBP16.45■□□□□ 0.22
CLDN11-208ENST00000488989 HACD1B0YJ81 288 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 ANHXE9PGG2 379 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 NCAM2O15394 837 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 TSPAN3O60637 253 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 ECI2O75521 394 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 PENKP01210 267 aaPredicted RBP16.45■□□□□ 0.22
CLDN11-208ENST00000488989 HOXD9P28356 352 aaPredicted RBP16.45■□□□□ 0.22
CLDN11-208ENST00000488989 COILP38432 576 aaPredicted RBP16.45■□□□□ 0.22
CLDN11-208ENST00000488989 VCPP55072 806 aaKnown RBP16.45■□□□□ 0.22
CLDN11-208ENST00000488989 YBEYP58557 167 aaPredicted RBP16.45■□□□□ 0.22
CLDN11-208ENST00000488989 GALNT2Q10471 571 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 SKIV2LQ15477 1246 aaKnown RBP16.45■□□□□ 0.22
CLDN11-208ENST00000488989 EML3Q32P44 896 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 FYB2Q5VWT5 728 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 MTSS1LQ765P7 747 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 SETD3Q86TU7 594 aaPredicted RBP16.45■□□□□ 0.22
CLDN11-208ENST00000488989 CIR1Q86X95 450 aaPredicted RBP16.45■□□□□ 0.22
CLDN11-208ENST00000488989 LRRN4CLQ8ND94 238 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 DEPDC1BQ8WUY9 529 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 ATG4AQ8WYN0 398 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 SLCO2A1Q92959 643 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 IRF7Q92985 503 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 RUNDC3BQ96NL0 473 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 FAM83CQ9BQN1 747 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 BRD8Q9H0E9 1235 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 DDX47Q9H0S4 455 aaKnown RBP16.45■□□□□ 0.22
CLDN11-208ENST00000488989 DNPEPQ9ULA0 475 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 HEY1Q9Y5J3 304 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 WNT6Q9Y6F9 365 aa16.45■□□□□ 0.22
CLDN11-208ENST00000488989 C5orf42Q9H799 3197 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 MCF2LO15068 1137 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 TBL1XO60907 577 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 LUC7L3O95232 432 aaKnown RBP16.44■□□□□ 0.22
CLDN11-208ENST00000488989 CYBBP04839 570 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 ITGAVP06756 1048 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 RBP3P10745 1247 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 MX2P20592 715 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 IFNAR2P48551 515 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 EIF3EP60228 445 aaKnown RBP16.44■□□□□ 0.22
CLDN11-208ENST00000488989 ZNF33AQ06730 810 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 BYSLQ13895 437 aaKnown RBP16.44■□□□□ 0.22
CLDN11-208ENST00000488989 PDK1Q15118 436 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 PDGFRLQ15198 375 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 TTC27Q6P3X3 843 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 PARM1Q6UWI2 310 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 ZNF783Q6ZMS7 281 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 TFAP2DQ7Z6R9 452 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 LRRC49Q8IUZ0 686 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 TP53INP2Q8IXH6 220 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 NOA1Q8NC60 698 aaKnown RBP16.44■□□□□ 0.22
CLDN11-208ENST00000488989 TTC16Q8NEE8 873 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 FGF14Q92915 247 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 HDAC11Q96DB2 347 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 ASIC4Q96FT7 647 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 PLA2G2FQ9BZM2 168 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 SLC39A8Q9C0K1 460 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms