RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 VCPP55072 806 aaKnown RBP19.97■□□□□ 0.79
CCM2-216ENST00000488727 PDGFRLQ15198 375 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 SIX1Q15475 284 aaPredicted RBP19.97■□□□□ 0.79
CCM2-216ENST00000488727 UAP1Q16222 522 aaPredicted RBP19.97■□□□□ 0.79
CCM2-216ENST00000488727 BRMS1LQ5PSV4 323 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 EMC10Q5UCC4 262 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 TMC3Q7Z5M5 1100 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 CPNE8Q86YQ8 564 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 FAM217AQ8IXS0 508 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 IRF7Q92985 503 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 AZIN2Q96A70 460 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 OTUB2Q96DC9 234 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 BTN2A3PQ96KV6 586 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 TKTL2Q9H0I9 626 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 IP6K2Q9UHH9 426 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 PLAAQ9Y263 795 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 ZNF510Q9Y2H8 683 aa19.97■□□□□ 0.79
CCM2-216ENST00000488727 GOLGA6L7A0A1B0GV03 622 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 A6NNZ2 444 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 ACSL4O60488 711 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 LRCH4O75427 683 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 LATS1O95835 1130 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 SLC6A4P31645 630 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 FNTAP49354 379 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 PIGHQ14442 188 aaPredicted RBP19.96■□□□□ 0.79
CCM2-216ENST00000488727 ZSCAN26Q16670 478 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 TUBB8Q3ZCM7 444 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 FAM133BQ5BKY9 247 aaKnown RBP19.96■□□□□ 0.79
CCM2-216ENST00000488727 IER5LQ5T953 404 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 CCDC185Q8N715 623 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 NIPA2Q8N8Q9 360 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 P2RY11Q96G91 374 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 TXLNGYQ9BZA5 131 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 DPH5Q9H2P9 285 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 SLC2A4RGQ9NR83 387 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 ZDHHC18Q9NUE0 388 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 NFS1Q9Y697 457 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 PPFIA2O75334 1257 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 PAGE1O75459 146 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 CYP17A1P05093 508 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 TCF4P15884 667 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 SLC11A2P49281 568 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 RUNX3Q13761 415 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 ADGRF1Q5T601 910 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 PIK3R6Q5UE93 754 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 ADAT2Q7Z6V5 191 aaKnown RBP19.96■□□□□ 0.79
CCM2-216ENST00000488727 ATP6V0D2Q8N8Y2 350 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 TTC8Q8TAM2 541 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 ATP2A3Q93084 1043 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 MAGOHBQ96A72 148 aaKnown RBP19.96■□□□□ 0.79
CCM2-216ENST00000488727 FAM129AQ9BZQ8 928 aa19.96■□□□□ 0.79
CCM2-216ENST00000488727 HMGB1P1B2RPK0 211 aaPredicted RBP19.95■□□□□ 0.78
CCM2-216ENST00000488727 TRDMT1O14717 391 aaKnown RBP19.95■□□□□ 0.78
CCM2-216ENST00000488727 PROSCO94903 275 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 KRT14P02533 472 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 IVLP07476 585 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 ACAP1Q15027 740 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 DHCR24Q15392 516 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 MS4A13Q5J8X5 152 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 LY6G5CQ5SRR4 150 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 SCYL2Q6P3W7 929 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 RFWD3Q6PCD5 774 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 RHBDF2Q6PJF5 856 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 TMEM25Q86YD3 366 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 CPXM2Q8N436 756 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 MAIP1Q8WWC4 291 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 SLCO2A1Q92959 643 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 MYEOVQ96EZ4 313 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 PEBP4Q96S96 227 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 FMO2Q99518 471 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 ECT2Q9H8V3 914 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 TRPV5Q9NQA5 729 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 SPHK2Q9NRA0 654 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 TMEM51Q9NW97 253 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 TTC28Q96AY4 2481 aa19.95■□□□□ 0.78
CCM2-216ENST00000488727 BDP1A6H8Y1 2624 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 GFRA2O00451 464 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 RNF8O76064 485 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 NFATC1O95644 943 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 DESP17661 470 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 MIPP30301 263 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 ADRA1BP35368 520 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 CHKAP35790 457 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 COILP38432 576 aaPredicted RBP19.94■□□□□ 0.78
CCM2-216ENST00000488727 HNRNPH2P55795 449 aaKnown RBP19.94■□□□□ 0.78
CCM2-216ENST00000488727 RAP1GAP2Q684P5 730 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 TTC27Q6P3X3 843 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 TPGS1Q6ZTW0 290 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 CYP4V2Q6ZWL3 525 aaPredicted RBP19.94■□□□□ 0.78
CCM2-216ENST00000488727 DNASE1L2Q92874 299 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 CHFRQ96EP1 664 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 ATP6V1G3Q96LB4 118 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 PRMT1Q99873 361 aaKnown RBP19.94■□□□□ 0.78
CCM2-216ENST00000488727 MAGEB5Q9BZ81 275 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 LRRC19Q9H756 370 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 TMBIM4Q9HC24 238 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 SLC12A6Q9UHW9 1150 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 HS3ST4Q9Y661 456 aa19.94■□□□□ 0.78
CCM2-216ENST00000488727 RARAP10276 462 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 MAN1A1P33908 653 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms