RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 CFAP52Q8N1V2 620 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 HJURPQ8NCD3 748 aaPredicted RBP16.3■□□□□ 0.2
APOE-205ENST00000485628 ATP2A3Q93084 1043 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 ALG14Q96F25 216 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 RPRD1AQ96P16 312 aaPredicted RBP16.3■□□□□ 0.2
APOE-205ENST00000485628 ASB2Q96Q27 587 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 CALN1Q9BXU9 219 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 EBF3Q9H4W6 596 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 ECT2Q9H8V3 914 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 CLEC4EQ9ULY5 219 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 OR51B4Q9Y5P0 310 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 SAR1BQ9Y6B6 198 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 KIAA1549LQ6ZVL6 1849 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 TSPAN3O60637 253 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 CISD3P0C7P0 127 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 KRT10P13645 584 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 GDI1P31150 447 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 CXCR5P32302 372 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 IFNAR2P48551 515 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 MAPKAPK2P49137 400 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 TNK2Q07912 1038 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 SLC10A2Q12908 348 aaPredicted RBP16.29■□□□□ 0.2
APOE-205ENST00000485628 RUNX3Q13761 415 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 SETD3Q86TU7 594 aaPredicted RBP16.29■□□□□ 0.2
APOE-205ENST00000485628 SLC13A5Q86YT5 568 aaPredicted RBP16.29■□□□□ 0.2
APOE-205ENST00000485628 ARHGAP12Q8IWW6 846 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 NPWQ8N729 165 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 OR52K2Q8NGK3 314 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 FIBINQ8TAL6 211 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 WFDC5Q8TCV5 224 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 ACTRT1Q8TDG2 376 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 SLC2A11Q9BYW1 496 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 LRRC19Q9H756 370 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 CATSPERBQ9H7T0 1116 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 SLC2A4RGQ9NR83 387 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 MFHAS1Q9Y4C4 1052 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 TICRRQ7Z2Z1 1910 aa16.29■□□□□ 0.2
APOE-205ENST00000485628 TCRBV7S2A1N4TA0A589 114 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 SHISA7A6NL88 538 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 ZNF185O15231 689 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 TBL1XO60907 577 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 LUC7L3O95232 432 aaKnown RBP16.28■□□□□ 0.2
APOE-205ENST00000485628 NFATC1O95644 943 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 ASGR2P07307 311 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 PLK1P53350 603 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 GAD2Q05329 585 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 FSCBQ5H9T9 825 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 ASTLQ6HA08 431 aaPredicted RBP16.28■□□□□ 0.2
APOE-205ENST00000485628 TPGS1Q6ZTW0 290 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 CIR1Q86X95 450 aaPredicted RBP16.28■□□□□ 0.2
APOE-205ENST00000485628 PHTF2Q8N3S3 785 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 LZTR1Q8N653 840 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.28■□□□□ 0.2
APOE-205ENST00000485628 PSMB7Q99436 277 aa16.28■□□□□ 0.2
APOE-205ENST00000485628 A0A0A0MRY4 1105 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 CST8O60676 142 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 ADH1CP00326 375 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 CYBBP04839 570 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 ADH5P11766 374 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 TYRP14679 529 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 OPRD1P41143 372 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 DNA2P51530 1060 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 NDST2P52849 883 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 TDGQ13569 410 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 TFDP2Q14188 446 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 RWDD4Q6NW29 188 aaKnown RBP16.27■□□□□ 0.2
APOE-205ENST00000485628 ZNF783Q6ZMS7 281 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 C12orf40Q86WS4 652 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 YAF2Q8IY57 180 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 TTC16Q8NEE8 873 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 DDI1Q8WTU0 396 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 DNASE1L2Q92874 299 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 OLFM3Q96PB7 478 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 BBS2Q9BXC9 721 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 DONSONQ9NYP3 566 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 GTSE1Q9NYZ3 720 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 STIM2Q9P246 746 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 RNF14Q9UBS8 474 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 SLC27A6Q9Y2P4 619 aa16.27■□□□□ 0.2
APOE-205ENST00000485628 F5P12259 2224 aa16.27■□□□□ 0.19
APOE-205ENST00000485628 TCF20Q9UGU0 1960 aaKnown RBP16.27■□□□□ 0.19
APOE-205ENST00000485628 ILVBLA1L0T0 632 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 APOC4-APOC2K7ER74 178 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 PDE2AO00408 941 aaPredicted RBP16.26■□□□□ 0.19
APOE-205ENST00000485628 CEP104O60308 925 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 TJP3O95049 919 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 APOC2P02655 101 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 ZFXP17010 805 aaPredicted RBP16.26■□□□□ 0.19
APOE-205ENST00000485628 TGM2P21980 687 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 GJA4P35212 333 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 EIF2DP41214 584 aaKnown RBP16.26■□□□□ 0.19
APOE-205ENST00000485628 YBEYP58557 167 aaPredicted RBP16.26■□□□□ 0.19
APOE-205ENST00000485628 GBE1Q04446 702 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 ITPRIPL2Q3MIP1 535 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 ZFYVE27Q5T4F4 411 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 SEL1L2Q5TEA6 688 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 ZNF572Q7Z3I7 529 aaPredicted RBP16.26■□□□□ 0.19
APOE-205ENST00000485628 TP53INP2Q8IXH6 220 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 CPA6Q8N4T0 437 aa16.26■□□□□ 0.19
APOE-205ENST00000485628 MS4A14Q96JA4 679 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms