RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 SMPD1P17405 629 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 AKAP5P24588 427 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 SPRP35270 261 aaPredicted RBP20.17■□□□□ 0.82
LIMS2-215ENST00000484252 IDH3AP50213 366 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 COPAP53621 1224 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 PDCD2Q16342 344 aaPredicted RBP20.17■□□□□ 0.82
LIMS2-215ENST00000484252 PID1Q7Z2X4 250 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 ADGRG6Q86SQ4 1221 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 WNT8BQ93098 351 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 CLPTM1LQ96KA5 538 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 OSMRQ99650 979 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 DDX43Q9NXZ2 648 aaKnown RBP20.17■□□□□ 0.82
LIMS2-215ENST00000484252 TMEM216Q9P0N5 145 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 PLXNB2O15031 1838 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 A0A088AWK7 358 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 SMIM35A0A1B0GVV1 85 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 EIF4E1BA6NMX2 242 aaKnown RBP20.17■□□□□ 0.82
LIMS2-215ENST00000484252 M0QYT0 321 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 DCLK1O15075 740 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 CREB3O43889 395 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 SIN3BO75182 1162 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 FAM163BP0C2L3 166 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 ERVK-10P10266 1014 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 CPA3P15088 417 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 NPR3P17342 541 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 DEUP1Q05D60 604 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 ZNF618Q5T7W0 954 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 OR6Y1Q8NGX8 325 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 CMTM5Q96DZ9 223 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 TSC22D3Q99576 134 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 RBBP8Q99708 897 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 SYT15Q9BQS2 421 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 CDHR5Q9HBB8 845 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 LRRC4Q9HBW1 653 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 SNX15Q9NRS6 342 aa20.17■□□□□ 0.82
LIMS2-215ENST00000484252 PIH1D1Q9NWS0 290 aaKnown RBP20.17■□□□□ 0.82
LIMS2-215ENST00000484252 PDCD11Q14690 1871 aaKnown RBP20.16■□□□□ 0.82
LIMS2-215ENST00000484252 MAGEA13PA6NCF6 341 aa20.16■□□□□ 0.82
LIMS2-215ENST00000484252 NCAM2O15394 837 aa20.16■□□□□ 0.82
LIMS2-215ENST00000484252 MPOP05164 745 aa20.16■□□□□ 0.82
LIMS2-215ENST00000484252 MLH1P40692 756 aa20.16■□□□□ 0.82
LIMS2-215ENST00000484252 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.16■□□□□ 0.82
LIMS2-215ENST00000484252 SREK1Q8WXA9 508 aaKnown RBP20.16■□□□□ 0.82
LIMS2-215ENST00000484252 NR1H4Q96RI1 486 aaPredicted RBP20.16■□□□□ 0.82
LIMS2-215ENST00000484252 CEP41Q9BYV8 373 aa20.16■□□□□ 0.82
LIMS2-215ENST00000484252 BRD8Q9H0E9 1235 aa20.16■□□□□ 0.82
LIMS2-215ENST00000484252 BFARQ9NZS9 450 aa20.16■□□□□ 0.82
LIMS2-215ENST00000484252 KLHL8Q9P2G9 620 aaPredicted RBP20.16■□□□□ 0.82
LIMS2-215ENST00000484252 NRCAMQ92823 1304 aa20.16■□□□□ 0.82
LIMS2-215ENST00000484252 ERI2A8K979 691 aaKnown RBP20.15■□□□□ 0.82
LIMS2-215ENST00000484252 MTSS1O43312 755 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 CCNT2O60583 730 aaKnown RBP20.15■□□□□ 0.82
LIMS2-215ENST00000484252 AP2A1O95782 977 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 SP100P23497 879 aaPredicted RBP20.15■□□□□ 0.82
LIMS2-215ENST00000484252 PRDX6P30041 224 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 PAPOLAP51003 745 aaKnown RBP20.15■□□□□ 0.82
LIMS2-215ENST00000484252 LIMK2P53671 638 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 ROR2Q01974 943 aaKnown RBP20.15■□□□□ 0.82
LIMS2-215ENST00000484252 IQSEC1Q6DN90 963 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 DPY19L2Q6NUT2 758 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 MAVSQ7Z434 540 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 SIX6OS1Q8N1H7 587 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 NTAN1Q96AB6 310 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 PNPOQ9NVS9 261 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 PCDHB12Q9Y5F1 795 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 CDY2AQ9Y6F7 541 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 CDY1Q9Y6F8 540 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 ZNF195O14628 629 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 H2AFYO75367 372 aaKnown RBP20.15■□□□□ 0.82
LIMS2-215ENST00000484252 USP1O94782 785 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 HCAR3P49019 387 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 PPM1JQ5JR12 505 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 PDPK2PQ6A1A2 396 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 TMEM135Q86UB9 458 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 DCLK2Q8N568 766 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 UCMAQ8WVF2 138 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 NDRG1Q92597 394 aaKnown RBP20.15■□□□□ 0.82
LIMS2-215ENST00000484252 LBHD1Q9BQE6 289 aaPredicted RBP20.15■□□□□ 0.82
LIMS2-215ENST00000484252 DLGAP2Q9P1A6 1054 aa20.15■□□□□ 0.82
LIMS2-215ENST00000484252 MAGEB16A2A368 324 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 TMEM114B3SHH9 223 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 FBXO21O94952 628 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 PTPN3P26045 913 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 GJA5P36382 358 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 PITX1P78337 314 aaPredicted RBP20.14■□□□□ 0.81
LIMS2-215ENST00000484252 DSG1Q02413 1049 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 SCAPQ12770 1279 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 FSCBQ5H9T9 825 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 INTS6LQ5JSJ4 861 aaKnown RBP20.14■□□□□ 0.81
LIMS2-215ENST00000484252 CWF19L1Q69YN2 538 aaKnown RBP20.14■□□□□ 0.81
LIMS2-215ENST00000484252 OSTM1Q86WC4 334 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 KBTBD2Q8IY47 623 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 OR52K1Q8NGK4 314 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 ZFAND2BQ8WV99 257 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 JADE3Q92613 823 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 ZNF669Q96BR6 464 aaPredicted RBP20.14■□□□□ 0.81
LIMS2-215ENST00000484252 FCRL3Q96P31 734 aaPredicted RBP20.14■□□□□ 0.81
LIMS2-215ENST00000484252 CASS4Q9NQ75 786 aa20.14■□□□□ 0.81
LIMS2-215ENST00000484252 PAPOLBQ9NRJ5 636 aaKnown RBP20.14■□□□□ 0.81
LIMS2-215ENST00000484252 KLK14Q9P0G3 267 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms