RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 TRIM36Q9NQ86 728 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 GIMAP4Q9NUV9 329 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 MARCH4Q9P2E8 410 aaPredicted RBP6.62□□□□□ -1.35
PBRM1-220ENST00000480064 CDH22Q9UJ99 828 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 FLT1P17948 1338 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 PER2O15055 1255 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 TGFB1I1O43294 461 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 URODP06132 367 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 RB1P06400 928 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 STMN1P16949 149 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 ATP5F1P24539 256 aaPredicted RBP6.61□□□□□ -1.35
PBRM1-220ENST00000480064 TBXAS1P24557 533 aaPredicted RBP6.61□□□□□ -1.35
PBRM1-220ENST00000480064 ICAM3P32942 547 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 TTKP33981 857 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 NRIP1P48552 1158 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 ZNF41P51814 821 aaPredicted RBP6.61□□□□□ -1.35
PBRM1-220ENST00000480064 RRP1P56182 461 aaKnown RBP6.61□□□□□ -1.35
PBRM1-220ENST00000480064 TAS2R50P59544 299 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 KRTAP10-2P60368 255 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 RAC3P60763 192 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 TMF1P82094 1093 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 PLP2Q04941 152 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 DPCR1Q3MIW9 517 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 TTC31Q49AM3 519 aaPredicted RBP6.61□□□□□ -1.35
PBRM1-220ENST00000480064 FAM90A2PQ658T7 463 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 WDR93Q6P2C0 686 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 C11orf88Q6PI97 169 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 PLEKHH3Q7Z736 793 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 CCDC170Q8IYT3 715 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 SUPT20HQ8NEM7 779 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 PRPF31Q8WWY3 499 aaKnown RBP6.61□□□□□ -1.35
PBRM1-220ENST00000480064 CNOT9Q92600 299 aaKnown RBP6.61□□□□□ -1.35
PBRM1-220ENST00000480064 TBC1D31Q96DN5 1066 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 SAT2Q96F10 170 aaPredicted RBP6.61□□□□□ -1.35
PBRM1-220ENST00000480064 ZNF764Q96H86 408 aaPredicted RBP6.61□□□□□ -1.35
PBRM1-220ENST00000480064 KLHL4Q9C0H6 718 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 EPHX3Q9H6B9 360 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 PFDN4Q9NQP4 134 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 TLR8Q9NR97 1041 aaKnown RBP6.61□□□□□ -1.35
PBRM1-220ENST00000480064 RRP7BPQ9NSQ0 103 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 IL1RAPL1Q9NZN1 696 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 CTTNBP2NLQ9P2B4 639 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 SUCLA2Q9P2R7 463 aaPredicted RBP6.61□□□□□ -1.35
PBRM1-220ENST00000480064 SLCO3A1Q9UIG8 710 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 SESN1Q9Y6P5 492 aa6.61□□□□□ -1.35
PBRM1-220ENST00000480064 SPATA31A3Q5VYP0 1347 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 A0A1B0GTL3 188 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 MFAP3LO75121 409 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 ENTPD3O75355 529 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 SUN1O94901 812 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 ADRB1P08588 477 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 C1SP09871 688 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 MYBL1P10243 752 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 SP100P23497 879 aaPredicted RBP6.6□□□□□ -1.35
PBRM1-220ENST00000480064 HNF4AP41235 474 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 PPP5CP53041 499 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 PSMC6P62333 389 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 CDK18Q07002 472 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 MTAPQ13126 283 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 TUBB3Q13509 450 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 TNFAIP1Q13829 316 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 C9orf152Q5JTZ5 239 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 SLC9A4Q6AI14 798 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 CCDC186Q7Z3E2 898 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 TICAM1Q8IUC6 712 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 UNC45BQ8IWX7 931 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 CARNMT1Q8N4J0 409 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 TMEM116Q8NCL8 245 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 APPL2Q8NEU8 664 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 CADM4Q8NFZ8 388 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 ATG4AQ8WYN0 398 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 RMDN1Q96DB5 314 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 CCDC34Q96HJ3 373 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 RAB3IPQ96QF0 476 aaPredicted RBP6.6□□□□□ -1.35
PBRM1-220ENST00000480064 FNBP1Q96RU3 617 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 CITED2Q99967 270 aaPredicted RBP6.6□□□□□ -1.35
PBRM1-220ENST00000480064 BDH2Q9BUT1 245 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 MSL2Q9HCI7 577 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 SLC25A13Q9UJS0 675 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 PPIEQ9UNP9 301 aaKnown RBP6.6□□□□□ -1.35
PBRM1-220ENST00000480064 MTMR6Q9Y217 621 aa6.6□□□□□ -1.35
PBRM1-220ENST00000480064 C9orf118A6NHY6 69 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 GLOD5A6NK44 160 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 A8MXE2 369 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 KCNJ18B7U540 433 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 CTDSP2O14595 271 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 GPR42O15529 346 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 PRICKLE3O43900 615 aaPredicted RBP6.59□□□□□ -1.35
PBRM1-220ENST00000480064 HBP1O60381 514 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 TBX10O75333 385 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 GPANK1O95872 356 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 THEGLP0DJG4 465 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 PEPDP12955 493 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 ZNF37AP17032 561 aaPredicted RBP6.59□□□□□ -1.35
PBRM1-220ENST00000480064 CXCR5P32302 372 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 CPOXP36551 454 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 ARHGAP8P85298 464 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 ALKBH1Q13686 389 aaKnown RBP6.59□□□□□ -1.35
PBRM1-220ENST00000480064 KCNJ12Q14500 433 aa6.59□□□□□ -1.35
PBRM1-220ENST00000480064 HLXQ14774 488 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms