RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 KANSL3Q9P2N6 904 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 SFMBT1Q9UHJ3 866 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 DCTN4Q9UJW0 460 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 SQORQ9Y6N5 450 aa13.34□□□□□ -0.27
SEC13-216ENST00000479868 IRAK2O43187 625 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 CABYRO75952 493 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 NEFHP12036 1026 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 MX2P20592 715 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 PAX3P23760 479 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 SERPINB6P35237 376 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 DSC1Q08554 894 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 SETDB1Q15047 1291 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 SLC39A12Q504Y0 691 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 TEX44Q53QW1 395 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 KCTD11Q693B1 232 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 RWDD4Q6NW29 188 aaKnown RBP13.33□□□□□ -0.28
SEC13-216ENST00000479868 GLB1LQ6UWU2 654 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 SCD5Q86SK9 330 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 CCNJLQ8IV13 435 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 KIF2BQ8N4N8 673 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 ZSCAN18Q8TBC5 510 aaPredicted RBP13.33□□□□□ -0.28
SEC13-216ENST00000479868 DPF3Q92784 378 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 HHIPL1Q96JK4 782 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 MLPHQ9BV36 600 aaPredicted RBP13.33□□□□□ -0.28
SEC13-216ENST00000479868 GBA3Q9H227 469 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 MKS1Q9NXB0 559 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 ARHGEF38Q9NXL2 777 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 NUDT5Q9UKK9 219 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 PCDHB8Q9UN66 801 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 MRPL42Q9Y6G3 142 aaKnown RBP13.33□□□□□ -0.28
SEC13-216ENST00000479868 NUMBLQ9Y6R0 609 aa13.33□□□□□ -0.28
SEC13-216ENST00000479868 ALDOAP04075 364 aaKnown RBP13.32□□□□□ -0.28
SEC13-216ENST00000479868 CCNB1P14635 433 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 NFKB1P19838 968 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 ALDH3A1P30838 453 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 ZNF135P52742 658 aaPredicted RBP13.32□□□□□ -0.28
SEC13-216ENST00000479868 BTBD8Q5XKL5 378 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 PACS1Q6VY07 963 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 C4orf50Q6ZRC1 276 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 ARHGAP36Q6ZRI8 547 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 SLC24A5Q71RS6 500 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 ASRGL1Q7L266 308 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 NLRP9Q7RTR0 991 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 PARP9Q8IXQ6 854 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 CASP10Q92851 521 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 KLHL29Q96CT2 875 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 GLT1D1Q96MS3 346 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 FCRL3Q96P31 734 aaPredicted RBP13.32□□□□□ -0.28
SEC13-216ENST00000479868 BRD8Q9H0E9 1235 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 OSBPL2Q9H1P3 480 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 NMUR1Q9HB89 426 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 ABCC13Q9NSE7 274 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 DNAJB4Q9UDY4 337 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 RPS6KL1Q9Y6S9 549 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 CFAP73A6NFT4 308 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 C2CD2LO14523 706 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 MGRN1O60291 552 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 DCTN3O75935 186 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 UNC5CO95185 931 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 EOMESO95936 686 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 POLBP06746 335 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 TROVE2P10155 538 aaKnown RBP eCLIP13.32□□□□□ -0.28
SEC13-216ENST00000479868 ERVK-10P10266 1014 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 NQO1P15559 274 aaKnown RBP13.32□□□□□ -0.28
SEC13-216ENST00000479868 SDHAF4Q5VUM1 108 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 CES4AQ5XG92 561 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 TIFABQ6ZNK6 161 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 BEND5Q7L4P6 421 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 SCN4BQ8IWT1 228 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 COLGALT2Q8IYK4 626 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 CDKL2Q92772 493 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 NAT9Q9BTE0 207 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 ABI2Q9NYB9 513 aaPredicted RBP13.32□□□□□ -0.28
SEC13-216ENST00000479868 UBP1Q9NZI7 540 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 SRRDQ9UH36 339 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 VANGL2Q9ULK5 521 aa13.32□□□□□ -0.28
SEC13-216ENST00000479868 PRG3Q9Y2Y8 225 aaPredicted RBP13.32□□□□□ -0.28
SEC13-216ENST00000479868 A0A0G2JND7 137 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 ARHGEF37A1IGU5 675 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 MTSS1O43312 755 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 PAGE1O75459 146 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 JCHAINP01591 159 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 CNTFP26441 200 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 CRHR1P34998 444 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 OR1G1P47890 313 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 NOMO2Q5JPE7 1267 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 ARTNQ5T4W7 220 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.31□□□□□ -0.28
SEC13-216ENST00000479868 DNAAF3Q8N9W5 541 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 TEKT5Q96M29 485 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 APOL2Q9BQE5 337 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 TRIM62Q9BVG3 475 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 SMOC2Q9H3U7 446 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 KCNK13Q9HB14 408 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 CASS4Q9NQ75 786 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 ARHGEF3Q9NR81 526 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 TBC1D13Q9NVG8 400 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 OSER1Q9NX31 292 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 TRHDEQ9UKU6 1024 aa13.31□□□□□ -0.28
SEC13-216ENST00000479868 MAGED2Q9UNF1 606 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms