RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 XRCC4Q13426 336 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 OLIG2Q13516 323 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 TMTC4Q5T4D3 741 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 PIGWQ7Z7B1 504 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 LRRC52Q8N7C0 313 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 SHCBP1Q8NEM2 672 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 PIWIL2Q8TC59 973 aaKnown RBP11.27□□□□□ -0.61
COL27A1-204ENST00000477421 ASIC4Q96FT7 647 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 MAML3Q96JK9 1138 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 CLPTM1LQ96KA5 538 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 KCTD15Q96SI1 283 aaPredicted RBP11.27□□□□□ -0.61
COL27A1-204ENST00000477421 SYT11Q9BT88 431 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 TCF7L2Q9NQB0 619 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 CYTH4Q9UIA0 394 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 PLA2G4CQ9UP65 541 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 SUPT3HB4E1H0 165 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 SUPT3HO75486 399 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 ASMTLO95671 621 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 HSPA8P11142 646 aaKnown RBP11.27□□□□□ -0.61
COL27A1-204ENST00000477421 ATP6V1B1P15313 513 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 ADRA1BP35368 520 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 BTKQ06187 659 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 MAP7Q14244 749 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 TARBP2Q15633 366 aaKnown RBP11.27□□□□□ -0.61
COL27A1-204ENST00000477421 SPRED3Q2MJR0 410 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 SGO1Q5FBB7 561 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 MARC1Q5VT66 337 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 FAM171A1Q5VUB5 890 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 MPP5Q8N3R9 675 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 STK32AQ8WU08 396 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 EME1Q96AY2 570 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 ULK4Q96C45 1275 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 NDNQ99608 321 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 NMRAL1Q9HBL8 299 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 LATS2Q9NRM7 1088 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 FAM105AQ9NUU6 356 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 CHKBQ9Y259 395 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 GRK2P25098 689 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 HADHAP40939 763 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 PKNOX1P55347 436 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 SIX1Q15475 284 aaPredicted RBP11.26□□□□□ -0.61
COL27A1-204ENST00000477421 OASLQ15646 514 aaKnown RBP11.26□□□□□ -0.61
COL27A1-204ENST00000477421 MAPRE1Q15691 268 aaKnown RBP11.26□□□□□ -0.61
COL27A1-204ENST00000477421 CCL14Q16627 93 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 ANKRD20A4Q4UJ75 823 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 SYPL2Q5VXT5 272 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 IZUMO2Q6UXV1 221 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 PSTKQ8IV42 348 aaKnown RBP11.26□□□□□ -0.61
COL27A1-204ENST00000477421 LRRC39Q96DD0 335 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 PNPOQ9NVS9 261 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 ZNF112Q9UJU3 913 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 CXorf49A8MYA2 514 aaPredicted RBP11.26□□□□□ -0.61
COL27A1-204ENST00000477421 PRR5-ARHGAP8B1AHC4 643 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 PIGNO95427 931 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 CLCNKBP51801 687 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 GEMP55040 296 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 GPX6P59796 221 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 ARHGAP8P85298 464 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 BNIP1Q12981 228 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 DDR2Q16832 855 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 ZRANB3Q5FWF4 1079 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 VWA5B1Q5TIE3 1220 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 FAM35AQ86V20 835 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 TMPRSS6Q8IU80 811 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 C10orf107Q8IVU9 208 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 CMASQ8NFW8 434 aaPredicted RBP11.26□□□□□ -0.61
COL27A1-204ENST00000477421 GIPC2Q8TF65 315 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 MYLPFQ96A32 169 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 DUSP16Q9BY84 665 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 RHOBTB2Q9BYZ6 727 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 RNPEPL1Q9HAU8 725 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 ARHGEF4Q9NR80 690 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 CHRAC1Q9NRG0 131 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 EFR3BQ9Y2G0 817 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 MFHAS1Q9Y4C4 1052 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 ANKRD36CQ5JPF3 1778 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 YJEFN3A6XGL0 299 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 NT5C1B-RDH14C9J2C7 533 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 E7ENQ6 273 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 CBX4O00257 560 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 DNAJB2P25686 324 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 RBBP7Q16576 425 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 NBPF20Q3BBV1 942 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 SLC25A52Q3SY17 297 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 OTOP3Q7RTS5 596 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 FAM13CQ8NE31 585 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 SPATA22Q8NHS9 363 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 MCRS1Q96EZ8 462 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 PEBP4Q96S96 227 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 MTG1Q9BT17 334 aaPredicted RBP11.26□□□□□ -0.61
COL27A1-204ENST00000477421 DTLQ9NZJ0 730 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 SLC27A5Q9Y2P5 690 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 STYXL1Q9Y6J8 313 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 LRP5O75197 1615 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 BTAF1O14981 1849 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 PRRG1O14668 218 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 RHOBTB1O94844 696 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 CSH1P0DML2 217 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 CSH2P0DML3 217 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms