RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 FBRSQ9HAH7 460 aa14.89□□□□□ -0.03
ABCF3-211ENST00000475728 ZDHHC4Q9NPG8 344 aa14.89□□□□□ -0.03
ABCF3-211ENST00000475728 POLR3BQ9NW08 1133 aaPredicted RBP14.89□□□□□ -0.03
ABCF3-211ENST00000475728 HCN2Q9UL51 889 aa14.89□□□□□ -0.03
ABCF3-211ENST00000475728 SMG5Q9UPR3 1016 aaKnown RBP14.89□□□□□ -0.03
ABCF3-211ENST00000475728 IGLV3-10A0A075B6K4 115 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 SSU72P8A0A1W2PR75 194 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 ANTXRLA6NF34 631 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 TMEM191CA6NGB0 347 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 DRGXA6NNA5 263 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 E9PAM4 449 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 CCP110O43303 1012 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 MFAP3LO75121 409 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 KRT37O76014 449 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 RNF8O76064 485 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 SRPRAP08240 638 aaKnown RBP14.88□□□□□ -0.03
ABCF3-211ENST00000475728 CSKP41240 450 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 PLK1P53350 603 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 HDAC4P56524 1084 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 RPL7AP62424 266 aaKnown RBP14.88□□□□□ -0.03
ABCF3-211ENST00000475728 SCAPQ12770 1279 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 PLEKHG6Q3KR16 790 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 FUT11Q495W5 492 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 PITRM1Q5JRX3 1037 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 EFHC2Q5JST6 749 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 TMEM215Q68D42 235 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 ALKBH5Q6P6C2 394 aaKnown RBP14.88□□□□□ -0.03
ABCF3-211ENST00000475728 TMC6Q7Z403 805 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 SLFN11Q7Z7L1 901 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 C14orf80Q86SX3 495 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 PGBD3Q8N328 593 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 HMGB4Q8WW32 186 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 SPACA7Q96KW9 195 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 RBSNQ9H1K0 784 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 ARHGAP20Q9P2F6 1191 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 PPARGC1AQ9UBK2 798 aaKnown RBP14.88□□□□□ -0.03
ABCF3-211ENST00000475728 OR12D3Q9UGF7 316 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 SUN2Q9UH99 717 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 TBC1D30Q9Y2I9 924 aa14.88□□□□□ -0.03
ABCF3-211ENST00000475728 A0A087X0T9 212 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 A0A1W2PQF6 199 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 AKR1B15C9JRZ8 316 aaPredicted RBP14.87□□□□□ -0.03
ABCF3-211ENST00000475728 HRO43593 1189 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 SRGAP2O75044 1071 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 PLEKP08567 350 aaPredicted RBP14.87□□□□□ -0.03
ABCF3-211ENST00000475728 FAM228BP0C875 321 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 PSMA2P25787 234 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 GGCXP38435 758 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 EIF4A3P38919 411 aaKnown RBP14.87□□□□□ -0.03
ABCF3-211ENST00000475728 NNMTP40261 264 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 IL12RB1P42701 662 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 ECT2LQ008S8 904 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 MAPK8IP2Q13387 824 aaPredicted RBP14.87□□□□□ -0.03
ABCF3-211ENST00000475728 FSCBQ5H9T9 825 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 CCDC122Q5T0U0 273 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 C6orf118Q5T5N4 469 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 SH3PXD2AQ5TCZ1 1133 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 SCYL2Q6P3W7 929 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 PRR23BQ6ZRT6 265 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 SETD3Q86TU7 594 aaPredicted RBP14.87□□□□□ -0.03
ABCF3-211ENST00000475728 CIR1Q86X95 450 aaPredicted RBP14.87□□□□□ -0.03
ABCF3-211ENST00000475728 ZNF683Q8IZ20 524 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 SUMF1Q8NBK3 374 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 MDGA1Q8NFP4 955 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 CYB5D2Q8WUJ1 264 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 SORCS1Q8WY21 1168 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 MRFAP1L1Q96HT8 127 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 ZYG11BQ9C0D3 744 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 ANLNQ9NQW6 1124 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 ABHD10Q9NUJ1 306 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 MYO1AQ9UBC5 1043 aa14.87□□□□□ -0.03
ABCF3-211ENST00000475728 RIF1Q5UIP0 2472 aaKnown RBP14.87□□□□□ -0.03
ABCF3-211ENST00000475728 MED19A0JLT2 244 aaPredicted RBP14.86□□□□□ -0.03
ABCF3-211ENST00000475728 EIF3CLB5ME19 914 aaKnown RBP14.86□□□□□ -0.03
ABCF3-211ENST00000475728 WASH3PC4AMC7 463 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 I6L893 689 aaPredicted RBP14.86□□□□□ -0.03
ABCF3-211ENST00000475728 ATMINO43313 823 aaPredicted RBP14.86□□□□□ -0.03
ABCF3-211ENST00000475728 AKR1B10O60218 316 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 ZNF217O75362 1048 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 RHOBTB1O94844 696 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 EPHX1P07099 455 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 RHOCP08134 193 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 KRT83P78385 493 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 ACAP1Q15027 740 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 ELF2Q15723 593 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 SLC18A3Q16572 532 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 LAIR1Q6GTX8 287 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 CXorf57Q6NSI4 855 aaKnown RBP14.86□□□□□ -0.03
ABCF3-211ENST00000475728 ZNF783Q6ZMS7 281 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 RUBCNQ92622 972 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 LOXL4Q96JB6 756 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 CCDC42Q96M95 316 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 EIF3CQ99613 913 aaKnown RBP14.86□□□□□ -0.03
ABCF3-211ENST00000475728 TPSD1Q9BZJ3 242 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 MUC3BQ9H195 1237 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 TMEM245Q9H330 911 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 DONSONQ9NYP3 566 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 NCDNQ9UBB6 729 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 VPS28Q9UK41 221 aa14.86□□□□□ -0.03
ABCF3-211ENST00000475728 GMEB2Q9UKD1 530 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms