RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TAF3Q5VWG9 929 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 CD276Q5ZPR3 534 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 VASNQ6EMK4 673 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 DPY19L2P1Q6NXN4 242 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 DCLRE1AQ6PJP8 1040 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 TMEM270Q6UE05 265 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 CEP57Q86XR8 500 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 CNGA4Q8IV77 575 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 LRRC8AQ8IWT6 810 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 TMEFF1Q8IYR6 380 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 AFAP1L2Q8N4X5 818 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 TC2NQ8N9U0 490 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 OR6B3Q8NGW1 331 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 PDLIM2Q96JY6 352 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 PPP1R10Q96QC0 940 aaKnown RBP4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 TMEM209Q96SK2 561 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 YME1L1Q96TA2 773 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 CHP1Q99653 195 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 BAG1Q99933 345 aaPredicted RBP4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 PAAF1Q9BRP4 392 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 EDEM3Q9BZQ6 932 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 PDCL3Q9H2J4 239 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 SNX25Q9H3E2 840 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 DEF6Q9H4E7 631 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 ELAC1Q9H777 363 aaKnown RBP4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 SMYD3Q9H7B4 428 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 NRDE2Q9H7Z3 1164 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 ACP6Q9NPH0 428 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 PLCB1Q9NQ66 1216 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 ABHD10Q9NUJ1 306 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 SLC38A7Q9NVC3 462 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 TBC1D13Q9NVG8 400 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 DNAJB4Q9UDY4 337 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 COQ4Q9Y3A0 265 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 NR2E3Q9Y5X4 410 aa4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 KIAA0100Q14667 2235 aaKnown RBP4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 ARID1BQ8NFD5 2236 aaPredicted RBP4.33□□□□□ -1.72
TMEM39A-204ENST00000468545 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 ANO9A1A5B4 782 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 ANKRD62A6NC57 917 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 A8MXQ7 604 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 TMCO5BA8MYB1 307 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 F8W810 466 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 RFXAPO00287 272 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 NRP1O14786 923 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 THAP12O43422 761 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 HCRTO43612 131 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 AKR1B10O60218 316 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 B4GALT3O60512 393 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 HUS1O60921 280 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 CSPG5O95196 566 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 ASS1P00966 412 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 SERPING1P05155 500 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 PFKMP08237 780 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 PLEKP08567 350 aaPredicted RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 CD19P15391 556 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 FERP16591 822 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 PI3P19957 117 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 TBXAS1P24557 533 aaPredicted RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 ACAT1P24752 427 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 RPL9P32969 192 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 CA8P35219 290 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 GNL1P36915 607 aaPredicted RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 PBX3P40426 434 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 SLC11A1P49279 550 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 KIF11P52732 1056 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 NDST1P52848 882 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 RABGGTBP53611 331 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 ITGA1P56199 1179 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 ARPP19P56211 112 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 BCAR1P56945 870 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 LINC00310P59036 64 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 LILRA4P59901 499 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 YWHAEP62258 255 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 KLHL30Q0D2K2 578 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 DBPQ10586 325 aaPredicted RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 BTG3Q14201 252 aaPredicted RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 SSPNQ14714 243 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 MTF1Q14872 753 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 UPP1Q16831 310 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 WSCD1Q658N2 575 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 CC2D1AQ6P1N0 951 aaPredicted RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 PSRC1Q6PGN9 363 aaPredicted RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 CYP26C1Q6V0L0 522 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 ENOSF1Q7L5Y1 443 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 PHLDB2Q86SQ0 1253 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 METTL23Q86XA0 190 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 PROSER1Q86XN7 944 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 FAM129CQ86XR2 697 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 TMTC1Q8IUR5 882 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 COLGALT2Q8IYK4 626 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 NXPE1Q8N323 547 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 EFHBQ8N7U6 833 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 UBR7Q8N806 425 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 LINC00482Q8N8I6 264 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 KIAA1958Q8N8K9 716 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 APPL2Q8NEU8 664 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 CXorf38Q8TB03 319 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 TAF4BQ92750 862 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 TOP1MTQ969P6 601 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms