RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SNX13Q9Y5W8 968 aa8.89□□□□□ -0.99
HPS4-209ENST00000466781 CASZ1Q86V15 1759 aa8.89□□□□□ -0.99
HPS4-209ENST00000466781 A0A0A6YYK5 440 aaPredicted RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 BAIAP3O94812 1187 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 IFNA16P05015 189 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CXCL8P10145 99 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 TARSP26639 723 aaKnown RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 TUBP50607 506 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 TCEA2Q15560 299 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 SLC39A12Q504Y0 691 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CACTIN-AS1Q8N1I8 211 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 KIF2BQ8N4N8 673 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 UXS1Q8NBZ7 420 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CELF6Q96J87 481 aaKnown RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 OLFM1Q99784 485 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 TINF2Q9BSI4 451 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 PIF1Q9H611 641 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 NEK6Q9HC98 313 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 UBP1Q9NZI7 540 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 IL1RAPL1Q9NZN1 696 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 ARHGAP28Q9P2N2 729 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 DNAJC16Q9Y2G8 782 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 SIK3Q9Y2K2 1263 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 ACOT9Q9Y305 439 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 RGPD8O14715 1765 aaPredicted RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 TRAV19A0A0A6YYK7 116 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CENPXA8MT69 81 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CYP11B1P15538 503 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 LBPP18428 481 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 VHLP40337 213 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CD151P48509 253 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 TUFMP49411 452 aaKnown RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 NUP107P57740 925 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 ADIGQ0VDE8 80 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 OVGP1Q12889 678 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 TRIM25Q14258 630 aaKnown RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 TSNQ15631 228 aaKnown RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 CCNI2Q6ZMN8 369 aaPredicted RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 LRRC74BQ6ZQY2 392 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CCDC149Q6ZUS6 474 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CEP68Q76N32 757 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 LRRC6Q86X45 466 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 TMEM132CQ8N3T6 1108 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 PIK3R5Q8WYR1 880 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 TMEM237Q96Q45 408 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 MIR1-1HGQ9H1L0 117 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 ADPRHL2Q9NX46 363 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 NCKIPSDQ9NZQ3 722 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 MCM8Q9UJA3 840 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 STON1Q9Y6Q2 735 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 TBC1D3BA6NDS4 549 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CCDC130P13994 396 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 IL5RAQ01344 420 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 PAGE2BQ5JRK9 111 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 FGD3Q5JSP0 725 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 GRTP1Q5TC63 336 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 PRMT9Q6P2P2 845 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 RXFP2Q8WXD0 754 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 WHRNQ9P202 907 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 ENOPH1Q9UHY7 261 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 ZNF112Q9UJU3 913 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 TNFSF13BQ9Y275 285 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 ADGRA3Q8IWK6 1321 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 PIPSLA2A3N6 862 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 SLC9A3R1O14745 358 aaPredicted RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 SKIV2L2P42285 1042 aaKnown RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 CASP4P49662 377 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 PTPN11Q06124 597 aaPredicted RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 CBWD6Q4V339 395 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 FAM98BQ52LJ0 330 aaKnown RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 ZDHHC17Q8IUH5 632 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CYP4X1Q8N118 509 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 EID3Q8N140 333 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 FBXO39Q8N4B4 442 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CD99L2Q8TCZ2 262 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 MAGEB18Q96M61 343 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 POP1Q99575 1024 aaKnown RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 ELOVL4Q9GZR5 314 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CISHQ9NSE2 258 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 ARIH1Q9Y4X5 557 aaPredicted RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 MEI4A8MW99 385 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 IGF2BP3O00425 579 aaKnown RBP eCLIP8.88□□□□□ -0.99
HPS4-209ENST00000466781 CES2O00748 559 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 ZBTB14O43829 449 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 ATP6V1B1P15313 513 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 DNAJC3Q13217 504 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 GRB10Q13322 594 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 SLC29A2Q14542 456 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 POU6F1Q14863 301 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 TRIM16LQ309B1 348 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 ARMC12Q5T9G4 340 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 CDC73Q6P1J9 531 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 LLGL2Q6P1M3 1020 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 PACS1Q6VY07 963 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 SH3BP5LQ7L8J4 393 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 BNIPLQ7Z465 357 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 TRAPPC5Q8IUR0 188 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 SIKE1Q9BRV8 207 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 ROGDIQ9GZN7 287 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 FANCEQ9HB96 536 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms