RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 NLRP14Q86W24 1093 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 CHSY1Q86X52 802 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 MAP7D3Q8IWC1 876 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 KLHL7Q8IXQ5 586 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 BHMTQ93088 406 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 ASIC4Q96FT7 647 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 ASB16Q96NS5 453 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 HINFPQ9BQA5 517 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 RPP25Q9BUL9 199 aaKnown RBP11.32□□□□□ -0.6
SCN9A-205ENST00000454569 DCLK3Q9C098 648 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 EPC1Q9H2F5 836 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 NOL6Q9H6R4 1146 aaKnown RBP11.32□□□□□ -0.6
SCN9A-205ENST00000454569 LIMD1Q9UGP4 676 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.32□□□□□ -0.6
SCN9A-205ENST00000454569 CLEC4EQ9ULY5 219 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 USP15Q9Y4E8 981 aaPredicted RBP11.32□□□□□ -0.6
SCN9A-205ENST00000454569 ZFP37Q9Y6Q3 630 aaPredicted RBP11.32□□□□□ -0.6
SCN9A-205ENST00000454569 V9GYY5 206 aaPredicted RBP11.32□□□□□ -0.6
SCN9A-205ENST00000454569 ATG2BQ96BY7 2078 aa11.32□□□□□ -0.6
SCN9A-205ENST00000454569 COL4A3Q01955 1670 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 ZNF487B1APH4 448 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 PFKLP17858 780 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 KCNA5P22460 613 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 PAFAH1B1P43034 410 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 HCAR3P49019 387 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 OTUD4Q01804 1114 aaKnown RBP11.31□□□□□ -0.6
SCN9A-205ENST00000454569 USP4Q13107 963 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 PROX2Q3B8N5 592 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 C5orf22Q49AR2 442 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 ADGRF1Q5T601 910 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 TFAP2DQ7Z6R9 452 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 FAM217AQ8IXS0 508 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 MNS1Q8NEH6 495 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 ACTL9Q8TC94 416 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 WFDC5Q8TCV5 224 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 SUSD6Q92537 303 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 AZIN2Q96A70 460 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 TBC1D31Q96DN5 1066 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 CELF6Q96J87 481 aaKnown RBP11.31□□□□□ -0.6
SCN9A-205ENST00000454569 ZFYVE19Q96K21 471 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 RPRD1AQ96P16 312 aaPredicted RBP11.31□□□□□ -0.6
SCN9A-205ENST00000454569 MAK16Q9BXY0 300 aaKnown RBP11.31□□□□□ -0.6
SCN9A-205ENST00000454569 PRDM6Q9NQX0 595 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 PLK2Q9NYY3 685 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 DTLQ9NZJ0 730 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 SLC12A6Q9UHW9 1150 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 DNPEPQ9ULA0 475 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 EFR3BQ9Y2G0 817 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 SH3BP1Q9Y3L3 701 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 HEY1Q9Y5J3 304 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 WNT6Q9Y6F9 365 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 TICRRQ7Z2Z1 1910 aa11.31□□□□□ -0.6
SCN9A-205ENST00000454569 TRIOO75962 3097 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 APOL1O14791 398 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 DAPK3O43293 454 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 TJP3O95049 919 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 FOSL2P15408 326 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 SLC11A2P49281 568 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 PAFAH1B3Q15102 231 aaKnown RBP11.3□□□□□ -0.6
SCN9A-205ENST00000454569 TRIM68Q6AZZ1 485 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 CES5AQ6NT32 575 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 ARHGAP36Q6ZRI8 547 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 TPGS1Q6ZTW0 290 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 VSIG1Q86XK7 387 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 TMEM25Q86YD3 366 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 ARHGAP12Q8IWW6 846 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 GLIS1Q8NBF1 620 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 DEPDC1BQ8WUY9 529 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 KRT12Q99456 494 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 UBE2ZQ9H832 354 aaPredicted RBP11.3□□□□□ -0.6
SCN9A-205ENST00000454569 STIM2Q9P246 746 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 RCOR3Q9P2K3 495 aaPredicted RBP11.3□□□□□ -0.6
SCN9A-205ENST00000454569 RNF14Q9UBS8 474 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 CD207Q9UJ71 328 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 CDH7Q9ULB5 785 aa11.3□□□□□ -0.6
SCN9A-205ENST00000454569 E2F8A0AVK6 867 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 CTAGE15A4D2H0 777 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 OTOL1A6NHN0 477 aaPredicted RBP11.29□□□□□ -0.6
SCN9A-205ENST00000454569 SOBPA7XYQ1 873 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 F5H5T6 163 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 APOC4-APOC2K7ER74 178 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 LIASO43766 372 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 APOC2P02655 101 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 CTAGE8P0CG41 777 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 LAMP2P13473 410 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 WEE1P30291 646 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 GBP2P32456 591 aaPredicted RBP11.29□□□□□ -0.6
SCN9A-205ENST00000454569 COILP38432 576 aaPredicted RBP11.29□□□□□ -0.6
SCN9A-205ENST00000454569 PTGIRP43119 386 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 NOMO1Q15155 1222 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 CYP1B1Q16678 543 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 FSCBQ5H9T9 825 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 PARM1Q6UWI2 310 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 VITQ6UXI7 678 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 CTAGE6Q86UF2 777 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 ZC3H18Q86VM9 953 aaKnown RBP11.29□□□□□ -0.6
SCN9A-205ENST00000454569 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 CTAGE4Q8IX94 777 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 SLC35B2Q8TB61 432 aa11.29□□□□□ -0.6
SCN9A-205ENST00000454569 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms