RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 NLRP14Q86W24 1093 aa24.76■■□□□ 1.55
CPSF4-207ENST00000451876 TERB1Q8NA31 727 aa24.76■■□□□ 1.55
CPSF4-207ENST00000451876 FIBINQ8TAL6 211 aa24.76■■□□□ 1.55
CPSF4-207ENST00000451876 FAM71BQ8TC56 605 aa24.76■■□□□ 1.55
CPSF4-207ENST00000451876 KRT35Q92764 455 aa24.76■■□□□ 1.55
CPSF4-207ENST00000451876 SLC2A11Q9BYW1 496 aa24.76■■□□□ 1.55
CPSF4-207ENST00000451876 EPHX3Q9H6B9 360 aa24.76■■□□□ 1.55
CPSF4-207ENST00000451876 ABCB8Q9NUT2 735 aa24.76■■□□□ 1.55
CPSF4-207ENST00000451876 KANSL1LA0AUZ9 987 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 ANTXRLA6NF34 631 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.75■■□□□ 1.55
CPSF4-207ENST00000451876 PSTPIP1O43586 416 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 CLDN11O75508 207 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 KAT7O95251 611 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 FTCDO95954 541 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 NUMBP49757 651 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 GEN1Q17RS7 908 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 C1orf228Q6PIY5 440 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 RFX8Q6ZV50 586 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 ZNF687Q8N1G0 1237 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 RAPGEF5Q92565 580 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 LTB4R2Q9NPC1 389 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 SLC27A6Q9Y2P4 619 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 ZSCAN12O43309 604 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 RHOQP17081 205 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 LMAN2Q12907 356 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 MMRN1Q13201 1228 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 KRT81Q14533 505 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 ZFYVE27Q5T4F4 411 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 SYCE1Q8N0S2 351 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 TSC1Q92574 1164 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 LMLNQ96KR4 655 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 TMEM248Q9NWD8 314 aa24.75■■□□□ 1.55
CPSF4-207ENST00000451876 PACSIN2Q9UNF0 486 aaPredicted RBP24.75■■□□□ 1.55
CPSF4-207ENST00000451876 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.74■■□□□ 1.55
CPSF4-207ENST00000451876 TMEM221A6NGB7 291 aa24.74■■□□□ 1.55
CPSF4-207ENST00000451876 M0R296 226 aa24.74■■□□□ 1.55
CPSF4-207ENST00000451876 EGFP01133 1207 aa24.74■■□□□ 1.55
CPSF4-207ENST00000451876 IL4RP24394 825 aa24.74■■□□□ 1.55
CPSF4-207ENST00000451876 ZNF177Q13360 481 aaPredicted RBP24.74■■□□□ 1.55
CPSF4-207ENST00000451876 DPYSL3Q14195 570 aa24.74■■□□□ 1.55
CPSF4-207ENST00000451876 UBXN2BQ14CS0 331 aa24.74■■□□□ 1.55
CPSF4-207ENST00000451876 KCTD6Q8NC69 237 aa24.74■■□□□ 1.55
CPSF4-207ENST00000451876 CSPG4P5Q96PW8 444 aa24.74■■□□□ 1.55
CPSF4-207ENST00000451876 CALN1Q9BXU9 219 aa24.74■■□□□ 1.55
CPSF4-207ENST00000451876 GGA2Q9UJY4 613 aa24.74■■□□□ 1.55
CPSF4-207ENST00000451876 TBC1D30Q9Y2I9 924 aa24.74■■□□□ 1.55
CPSF4-207ENST00000451876 LRRD1A4D1F6 860 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 PRRT4C9JH25 899 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 KRT1P04264 644 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 OR1E1P30953 314 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 HTR7P34969 479 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 CTNNA1P35221 906 aaKnown RBP24.73■■□□□ 1.55
CPSF4-207ENST00000451876 ARL4AP40617 200 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 CCINQ13939 588 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 DPYSQ14117 519 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 TMEM215Q68D42 235 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 CWF19L1Q69YN2 538 aaKnown RBP24.73■■□□□ 1.55
CPSF4-207ENST00000451876 PEX26Q7Z412 305 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 RTL3Q8N8U3 475 aaKnown RBP24.73■■□□□ 1.55
CPSF4-207ENST00000451876 MFSD1Q9H3U5 465 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 DNAI1Q9UI46 699 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 INTS6Q9UL03 887 aaKnown RBP24.73■■□□□ 1.55
CPSF4-207ENST00000451876 NUP205Q92621 2012 aa24.73■■□□□ 1.55
CPSF4-207ENST00000451876 MUC22E2RYF6 1773 aaPredicted RBP24.73■■□□□ 1.55
CPSF4-207ENST00000451876 C3orf70A6NLC5 250 aaPredicted RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 H3BRJ5 948 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 APODP05090 189 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 PABPC1P11940 636 aaKnown RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 MZF1P28698 734 aaPredicted RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 CSKP41240 450 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 GRIA2P42262 883 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 GRSF1Q12849 480 aaKnown RBP eCLIP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 ANKS1BQ7Z6G8 1248 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 KIAA0907Q7Z7F0 614 aaPredicted RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 CCDC117Q8IWD4 279 aaPredicted RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 SUGP1Q8IWZ8 645 aaKnown RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 FLCNQ8NFG4 579 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 RBM12Q9NTZ6 932 aaKnown RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 AMFRQ9UKV5 643 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 MFHAS1Q9Y4C4 1052 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 CUL9Q8IWT3 2517 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 NYNRINQ9P2P1 1898 aaKnown RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 MYO18AQ92614 2054 aaKnown RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 K7EQS6 105 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 STK25O00506 426 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 FGF10O15520 208 aaPredicted RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 ERCC2P18074 760 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 KDELR1P24390 212 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 HCAR3P49019 387 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 ZNF135P52742 658 aaPredicted RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 FZD5Q13467 585 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 PDK2Q15119 407 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 FUT11Q495W5 492 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 ADIPOR2Q86V24 386 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 ZNF557Q8N988 423 aaPredicted RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 PJA1Q8NG27 643 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 CATSPERBQ9H7T0 1116 aa24.72■■□□□ 1.55
CPSF4-207ENST00000451876 KIAA1522Q9P206 1035 aaPredicted RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms