RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 CAB39LQ9H9S4 337 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 DMAP1Q9NPF5 467 aaPredicted RBP11.22□□□□□ -0.61
DDX56-203ENST00000421223 CHST12Q9NRB3 414 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 TXLNGQ9NUQ3 528 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 MPP6Q9NZW5 540 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 NUMBLQ9Y6R0 609 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 LAMA2P24043 3122 aaKnown RBP11.22□□□□□ -0.61
DDX56-203ENST00000421223 CFAP73A6NFT4 308 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 H0Y3Z8 333 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 LYPLA1O75608 230 aaPredicted RBP11.22□□□□□ -0.61
DDX56-203ENST00000421223 SOAT2O75908 522 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 C1QAP02745 245 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 RPSAP08865 295 aaKnown RBP11.22□□□□□ -0.61
DDX56-203ENST00000421223 SLC10A3P09131 477 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 ALADP13716 330 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 ETV4P43268 484 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 GPR15P49685 360 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 YWHAHQ04917 246 aaPredicted RBP11.22□□□□□ -0.61
DDX56-203ENST00000421223 PRKD1Q15139 912 aaPredicted RBP11.22□□□□□ -0.61
DDX56-203ENST00000421223 INTS6LQ5JSJ4 861 aaKnown RBP11.22□□□□□ -0.61
DDX56-203ENST00000421223 ZNF276Q8N554 614 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 CHRAC1Q9NRG0 131 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 RNF186Q9NXI6 227 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 PPARGC1AQ9UBK2 798 aaKnown RBP11.22□□□□□ -0.61
DDX56-203ENST00000421223 VANGL2Q9ULK5 521 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 A0A0U1RQF3 1178 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 FAM159BA6NKW6 160 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 CA12O43570 354 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 MT-CYBP00156 380 aaPredicted RBP11.21□□□□□ -0.61
DDX56-203ENST00000421223 GRK4P32298 578 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 RPL9P32969 192 aaKnown RBP11.21□□□□□ -0.61
DDX56-203ENST00000421223 INHBEP58166 350 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 N4BP2L1Q5TBK1 243 aaPredicted RBP11.21□□□□□ -0.61
DDX56-203ENST00000421223 LRRC8BQ6P9F7 803 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 PACS1Q6VY07 963 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 ALYREFQ86V81 257 aaKnown RBP11.21□□□□□ -0.61
DDX56-203ENST00000421223 LONP2Q86WA8 852 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 TTC16Q8NEE8 873 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 IPMKQ8NFU5 416 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 ARNTL2Q8WYA1 636 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 RSPH1Q8WYR4 309 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 FCRL3Q96P31 734 aaPredicted RBP11.21□□□□□ -0.61
DDX56-203ENST00000421223 SSU72Q9NP77 194 aaKnown RBP11.21□□□□□ -0.61
DDX56-203ENST00000421223 PNPLA8Q9NP80 782 aa11.21□□□□□ -0.61
DDX56-203ENST00000421223 HHLA1C9JL84 531 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 AOC2O75106 756 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 PMPCBO75439 489 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 SLC5A3P53794 718 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 ITKQ08881 620 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 TUSC3Q13454 348 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 DLG2Q15700 870 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 PCSK7Q16549 785 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 WLSQ5T9L3 541 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 TFAP2DQ7Z6R9 452 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 STRA8Q7Z7C7 330 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 PSTKQ8IV42 348 aaKnown RBP11.21□□□□□ -0.62
DDX56-203ENST00000421223 TNS4Q8IZW8 715 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 KCNV2Q8TDN2 545 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 FAM193BQ96PV7 902 aaPredicted RBP11.21□□□□□ -0.62
DDX56-203ENST00000421223 C20orf96Q9NUD7 363 aaPredicted RBP11.21□□□□□ -0.62
DDX56-203ENST00000421223 RCOR3Q9P2K3 495 aaPredicted RBP11.21□□□□□ -0.62
DDX56-203ENST00000421223 KANSL3Q9P2N6 904 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 PTCH2Q9Y6C5 1203 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 ZSWIM8A7E2V4 1837 aa11.21□□□□□ -0.62
DDX56-203ENST00000421223 B4GALT3O60512 393 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 HAUS5O94927 633 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 PGAM1P18669 254 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 HOXC8P31273 242 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 PBX3P40426 434 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 MAGEA3P43357 314 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 GLUD2P49448 558 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 SATB1Q01826 763 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 POU6F1Q14863 301 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 PAFAH1B3Q15102 231 aaKnown RBP11.2□□□□□ -0.62
DDX56-203ENST00000421223 PREPLQ4J6C6 727 aaPredicted RBP11.2□□□□□ -0.62
DDX56-203ENST00000421223 GLB1LQ6UWU2 654 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 SH2D5Q6ZV89 423 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 MIB1Q86YT6 1006 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 SMC1BQ8NDV3 1235 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 AGAP11Q8TF27 550 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 MOCOSQ96EN8 888 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 ZNF778Q96MU6 729 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 CPSF2Q9P2I0 782 aaKnown RBP11.2□□□□□ -0.62
DDX56-203ENST00000421223 ZNF487B1APH4 448 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 NT5C1B-RDH14C9J2C7 533 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 ADAMTS4O75173 837 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 PAGE1O75459 146 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 F9P00740 461 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 ITGA2BP08514 1039 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 MAGEA6P43360 314 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 ALDH18A1P54886 795 aaKnown RBP11.2□□□□□ -0.62
DDX56-203ENST00000421223 AQP5P55064 265 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 STX3Q13277 289 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 FASTKD1Q53R41 847 aaKnown RBP11.2□□□□□ -0.62
DDX56-203ENST00000421223 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 DNAJC14Q6Y2X3 702 aaPredicted RBP11.2□□□□□ -0.62
DDX56-203ENST00000421223 RGS9BPQ6ZS82 235 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 CLNKQ7Z7G1 428 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 CASP10Q92851 521 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms