RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 PRAMEF14Q5SWL7 426 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 ANKRD40Q6AI12 368 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 TBC1D3GQ6DHY5 549 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 TBC1D3CQ6IPX1 549 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 CHSY1Q86X52 802 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 TBC1D3Q8IZP1 549 aaPredicted RBP16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 CFAP52Q8N1V2 620 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 OXR1Q8N573 874 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 KDM1BQ8NB78 822 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 CLEC4CQ8WTT0 213 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 SLC35F5Q8WV83 523 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 SMARCE1Q969G3 411 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 SERAC1Q96JX3 654 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 GSDMAQ96QA5 445 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 TPX2Q9ULW0 747 aaKnown RBP16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 PTPRBP23467 1997 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 TMEM131Q92545 1883 aa16.12■□□□□ 0.17
SBDSP1-201ENST00000415772 TTC34A8MYJ7 566 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 PAPSS1O43252 624 aaPredicted RBP16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 LUC7L3O95232 432 aaKnown RBP16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 C5AR1P21730 350 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 ACADSBP45954 432 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 MCCD1P59942 119 aaPredicted RBP16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 HS1BP3Q53T59 392 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 MS4A13Q5J8X5 152 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 KCNT1Q5JUK3 1230 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 DSG4Q86SJ6 1040 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 PRPF39Q86UA1 669 aaKnown RBP16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 LGI2Q8N0V4 545 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 EID2Q8N6I1 236 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 DQX1Q8TE96 717 aaKnown RBP16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 TFAP2BQ92481 460 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 SLC35C1Q96A29 364 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 PRICKLE1Q96MT3 831 aaPredicted RBP16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 NUCKS1Q9H1E3 243 aaKnown RBP16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 PCDHGA1Q9Y5H4 931 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 PLXNB3Q9ULL4 1909 aa16.11■□□□□ 0.17
SBDSP1-201ENST00000415772 BAHCC1Q9P281 2608 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 TRIM49BA6NDI0 452 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 F5H5T6 163 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 RRP8O43159 456 aaKnown RBP16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 MAGEC1O60732 1142 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 C1SP09871 688 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 KRT5P13647 590 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 GOT1P17174 413 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 CCR5P51681 352 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 SEMG2Q02383 582 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 NNTQ13423 1086 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 PKDCCQ504Y2 493 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 DCAF6Q58WW2 860 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 NADSYN1Q6IA69 706 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 MMS22LQ6ZRQ5 1243 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 ATP6V0D2Q8N8Y2 350 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 PIP4K2CQ8TBX8 421 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 ADAM32Q8TC27 787 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 RNF34Q969K3 372 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 RPL10LQ96L21 214 aaKnown RBP16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 FCRL2Q96LA5 508 aaPredicted RBP16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 PPP1R9BQ96SB3 815 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 SERGEFQ9UGK8 458 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 ADAMTS1Q9UHI8 967 aa16.1■□□□□ 0.17
SBDSP1-201ENST00000415772 MED7O43513 233 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 C7P10643 843 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 ZNF18P17022 549 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 PPP1R2P41236 205 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 CTSOP43234 321 aaPredicted RBP16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 DNAJC3Q13217 504 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 CAMK2BQ13554 666 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 SLC12A1Q13621 1099 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 ELAVL3Q14576 367 aaKnown RBP16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 ACCSLQ4AC99 568 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 COBLL1Q53SF7 1204 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 RABGAP1LQ5R372 815 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 C9orf64Q5T6V5 341 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 RAP1GAP2Q684P5 730 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 RRAGAQ7L523 313 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 STK40Q8N2I9 435 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 UBR7Q8N806 425 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 MYO19Q96H55 970 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 BTN2A3PQ96KV6 586 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 MRGPRX3Q96LB0 322 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 SLC25A13Q9UJS0 675 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 INTS6Q9UL03 887 aaKnown RBP16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 NAALADL1Q9UQQ1 740 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 ATRXP46100 2492 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 DMXL2Q8TDJ6 3036 aa16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 DSPP15924 2871 aaKnown RBP16.09■□□□□ 0.17
SBDSP1-201ENST00000415772 PLXNA2O75051 1894 aa16.08■□□□□ 0.17
SBDSP1-201ENST00000415772 A0A087WV48 116 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 TLR4O00206 839 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 TACR2P21452 398 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 EPHA8P29322 1005 aaPredicted RBP16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 ADPRHP54922 357 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 OXCT1P55809 520 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 SULT2A1Q06520 285 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 STAT4Q14765 748 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 ARID5BQ14865 1188 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 FSCBQ5H9T9 825 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 FAM46CQ5VWP2 391 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms