RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 AFMIDQ63HM1 303 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 DENND2CQ68D51 928 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 LRIG3Q6UXM1 1119 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 LRRC31Q6UY01 552 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 ARHGAP36Q6ZRI8 547 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 ARHGEF18Q6ZSZ5 1173 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 TRMT10CQ7L0Y3 403 aaKnown RBP14.44□□□□□ -0.1
GPNMB-203ENST00000409458 SLC22A17Q8WUG5 538 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 WBP2Q969T9 261 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 PLD4Q96BZ4 506 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 ABHD8Q96I13 439 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 SH3GL2Q99962 352 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 KLF16Q9BXK1 252 aaPredicted RBP14.44□□□□□ -0.1
GPNMB-203ENST00000409458 ZYG11BQ9C0D3 744 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 SLC39A8Q9C0K1 460 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 SAYSD1Q9NPB0 183 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 MED4Q9NPJ6 270 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 GKN1Q9NS71 199 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 NINJ2Q9NZG7 142 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 YBX2Q9Y2T7 364 aaKnown RBP14.44□□□□□ -0.1
GPNMB-203ENST00000409458 F5H423 210 aaPredicted RBP14.43□□□□□ -0.1
GPNMB-203ENST00000409458 CCL16O15467 120 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 ACSL4O60488 711 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 BANF1O75531 89 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 STC2O76061 302 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 STK10O94804 968 aaKnown RBP14.43□□□□□ -0.1
GPNMB-203ENST00000409458 SHBGP04278 402 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 RB1P06400 928 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 NUDT17P0C025 328 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 RHOQP17081 205 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 TACR2P21452 398 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 PTPN3P26045 913 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 GABRR2P28476 465 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 CORO1AP31146 461 aaKnown RBP14.43□□□□□ -0.1
GPNMB-203ENST00000409458 SLC6A4P31645 630 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 COG7P83436 770 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 CYP4F8P98187 520 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 ZNF844Q08AG5 666 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 FASTKD3Q14CZ7 662 aaKnown RBP14.43□□□□□ -0.1
GPNMB-203ENST00000409458 FAM133BQ5BKY9 247 aaKnown RBP14.43□□□□□ -0.1
GPNMB-203ENST00000409458 C4orf22Q6V702 233 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 GAREM2Q75VX8 874 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 TFAP2DQ7Z6R9 452 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 CIR1Q86X95 450 aaPredicted RBP14.43□□□□□ -0.1
GPNMB-203ENST00000409458 RELL1Q8IUW5 271 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 ZNF567Q8N184 647 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 LZTR1Q8N653 840 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 MICAL1Q8TDZ2 1067 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 ZFRQ96KR1 1074 aaKnown RBP14.43□□□□□ -0.1
GPNMB-203ENST00000409458 SLC22A12Q96S37 553 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 FERMT1Q9BQL6 677 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 BRD8Q9H0E9 1235 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 LRRC4CQ9HCJ2 640 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 TMEM248Q9NWD8 314 aa14.43□□□□□ -0.1
GPNMB-203ENST00000409458 DRGXA6NNA5 263 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 SMAPO00193 183 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 OPHN1O60890 802 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 ACSL3O95573 720 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 OLFM2O95897 454 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 KLKB1P03952 638 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 MBL2P11226 248 aaPredicted RBP14.42□□□□□ -0.1
GPNMB-203ENST00000409458 MAGEA6P43360 314 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 HARS2P49590 506 aaKnown RBP14.42□□□□□ -0.1
GPNMB-203ENST00000409458 ZBTB17Q13105 803 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 MTA1Q13330 715 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 SLC29A2Q14542 456 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 HIF1AQ16665 826 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 HSP90B2PQ58FF3 399 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 PPM1LQ5SGD2 360 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 CEP85LQ5SZL2 805 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 FNBP1LQ5T0N5 605 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 ACBD5Q5T8D3 534 aaPredicted RBP14.42□□□□□ -0.1
GPNMB-203ENST00000409458 TXNDC8Q6A555 127 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 CEP128Q6ZU80 1094 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 DENND1CQ8IV53 801 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 CCDC13Q8IYE1 715 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 ATPAF2Q8N5M1 289 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 UHMK1Q8TAS1 419 aaKnown RBP14.42□□□□□ -0.1
GPNMB-203ENST00000409458 C9orf72Q96LT7 481 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 RPRD1AQ96P16 312 aaPredicted RBP14.42□□□□□ -0.1
GPNMB-203ENST00000409458 TGS1Q96RS0 853 aaKnown RBP14.42□□□□□ -0.1
GPNMB-203ENST00000409458 NOL6Q9H6R4 1146 aaKnown RBP14.42□□□□□ -0.1
GPNMB-203ENST00000409458 SMPD4Q9NXE4 827 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 ZNF212Q9UDV6 495 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 CHD9Q3L8U1 2897 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 CLUHO75153 1309 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 F5H5T6 163 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 LPXNO60711 386 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 ZNF189O75820 626 aaPredicted RBP14.42□□□□□ -0.1
GPNMB-203ENST00000409458 TTC4O95801 387 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 PBX2P40425 430 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 MAGEA4P43358 317 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 ARL4CP56559 192 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 MTM1Q13496 603 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 SEMA5AQ13591 1074 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 MSS51Q4VC12 460 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 PABPC1LQ4VXU2 614 aaKnown RBP14.42□□□□□ -0.1
GPNMB-203ENST00000409458 HP1BP3Q5SSJ5 553 aaPredicted RBP14.42□□□□□ -0.1
GPNMB-203ENST00000409458 RFWD3Q6PCD5 774 aa14.42□□□□□ -0.1
GPNMB-203ENST00000409458 CENPUQ71F23 418 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms