RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CLEC3BP05452 202 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 HKR1P10072 659 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 ALOX12P18054 663 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 RARSP54136 660 aaKnown RBP5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 CDH15P55291 814 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 WDR5P61964 334 aaKnown RBP5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 TAP1Q03518 808 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 MAMLD1Q13495 774 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 CCNG2Q16589 344 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 MEA1Q16626 185 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 PRICKLE4Q2TBC4 344 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 GXYLT1Q4G148 440 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 SLC22A25Q6T423 547 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 KIRREL2Q6UWL6 708 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 CCDC129Q6ZRS4 1044 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 RHOUQ7L0Q8 258 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 RRM2BQ7LG56 351 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 LAS2Q8IYD9 372 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 CCDC105Q8IYK2 499 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 ADSSL1Q8N142 457 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 CLEC4CQ8WTT0 213 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 TFAP2BQ92481 460 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 SLC9A6Q92581 669 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 TBC1D5Q92609 795 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 EXTL1Q92935 676 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 ERP27Q96DN0 273 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 SAAL1Q96ER3 474 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 EDC3Q96F86 508 aaKnown RBP5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 C5orf34Q96MH7 638 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 HS6ST2Q96MM7 605 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 HERC2P3Q9BVR0 1158 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 PHF7Q9BWX1 381 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 NPLQ9BXD5 320 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 MROH8Q9H579 483 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 DLL3Q9NYJ7 618 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 ANKFY1Q9P2R3 1169 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 LRIT1Q9P2V4 623 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 SLC25A10Q9UBX3 287 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 VPS4AQ9UN37 437 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 GPR34Q9UPC5 381 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 RPS6KL1Q9Y6S9 549 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 MAST3O60307 1309 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 MAP3K1Q13233 1512 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 FHAD1B1AJZ9 1412 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 A0A0G2JLL6 359 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 VWC2LB2RUY7 222 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 GTPBP1O00178 669 aaKnown RBP5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 EBLN1P0CF75 366 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 CYP4B1P13584 511 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 GGT5P36269 586 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 GRIA3P42263 894 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 MRPS35P82673 323 aaKnown RBP5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 PTP4A2Q12974 167 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 NAA25Q14CX7 972 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 ZNF766Q5HY98 468 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 ZNF280DQ6N043 979 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 KLHL24Q6TFL4 600 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 H1FNTQ75WM6 255 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 GALNT7Q86SF2 657 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 PALM2Q8IXS6 379 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 GALNT4Q8N4A0 578 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 BEND2Q8NDZ0 799 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 CXorf38Q8TB03 319 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 CACTINQ8WUQ7 758 aaKnown RBP5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 KCNJ9Q92806 393 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 KIF1BPQ96EK5 621 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 RNFT2Q96EX2 444 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 HIC2Q96JB3 615 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 COQ10AQ96MF6 247 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 C8orf49Q96NF6 230 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 LENG8Q96PV6 779 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 TRIM31Q9BZY9 425 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 SYNCQ9H7C4 482 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 EIF2B3Q9NR50 452 aaKnown RBP5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 GAR1Q9NY12 217 aaKnown RBP5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 KCND2Q9NZV8 630 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 MAFFQ9ULX9 164 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 CAMK2AQ9UQM7 478 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 TSC22D4Q9Y3Q8 395 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 SIRT4Q9Y6E7 314 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 GAPVD1Q14C86 1478 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 CLSPNQ9HAW4 1339 aa5.17□□□□□ -1.58
HMGB3P18-201ENST00000406327 CCNB3Q8WWL7 1395 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 FAM90A7PA6NKC0 464 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 FAM90A22PA8MWA6 464 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 FAM90A12PA8MX19 464 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 FAM90A23PA8MXZ1 464 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 H0YIZ8 118 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 H3BNC9 293 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 SYN3O14994 580 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 PRAMEF2O60811 474 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 TMCC2O75069 709 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 HOXB9P17482 250 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 GSTM2P28161 218 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 NDUFS1P28331 727 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 PCSK6P29122 969 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 EPHA8P29322 1005 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 BSGP35613 385 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 MVDP53602 400 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 EIF3BP55884 814 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms