RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 INSCQ1MX18 579 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 KLHL12Q53G59 568 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 GJB7Q6PEY0 223 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 SH3BP5LQ7L8J4 393 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 DEFB132Q7Z7B7 95 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 C12orf56Q8IXR9 622 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 SP8Q8IXZ3 490 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 C7orf57Q8NEG2 295 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 CDKL2Q92772 493 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 CCDC120Q96HB5 630 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 PRR11Q96HE9 360 aaPredicted RBP7.79□□□□□ -1.16
VTI1A-201ENST00000393077 BBS2Q9BXC9 721 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 EPB41L4BQ9H329 900 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 TRIT1Q9H3H1 467 aaKnown RBP7.79□□□□□ -1.16
VTI1A-201ENST00000393077 SCPEP1Q9HB40 452 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 BRD7Q9NPI1 651 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 AGO2Q9UKV8 859 aaKnown RBP7.79□□□□□ -1.16
VTI1A-201ENST00000393077 ITGA11Q9UKX5 1188 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 B3GNT3Q9Y2A9 372 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 SMIM22K7EJ46 135 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 TCEA3O75764 348 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 KRT1P04264 644 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 COX4I1P13073 169 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 M6PRP20645 277 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 RRM1P23921 792 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 HPCAL1P37235 193 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 PTPN9P43378 593 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 ABCG1P45844 678 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 RECQLP46063 649 aaPredicted RBP7.79□□□□□ -1.16
VTI1A-201ENST00000393077 MMRN1Q13201 1228 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 PTK6Q13882 451 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 TFDP1Q14186 410 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 EARS2Q5JPH6 523 aaKnown RBP7.79□□□□□ -1.16
VTI1A-201ENST00000393077 SPANXN2Q5MJ10 180 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 C12orf60Q5U649 245 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 CYP2R1Q6VVX0 501 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 ZCCHC23Q6ZST2 131 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 SLC51BQ86UW2 128 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 CCDC60Q8IWA6 550 aaPredicted RBP7.79□□□□□ -1.16
VTI1A-201ENST00000393077 FAM109AQ8N4B1 249 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 KIAA0895Q8NCT3 520 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 VANGL1Q8TAA9 524 aaPredicted RBP7.79□□□□□ -1.16
VTI1A-201ENST00000393077 APOL4Q9BPW4 351 aa7.79□□□□□ -1.16
VTI1A-201ENST00000393077 BAZ2BQ9UIF8 2168 aaKnown RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 SOBPA7XYQ1 873 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 ATMINO43313 823 aaPredicted RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 BUD23O43709 281 aaKnown RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 IFNA14P01570 189 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 HSMCR30P0CW71 290 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF135P52742 658 aaPredicted RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 NDST2P52849 883 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 OR2B6P58173 313 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 SNAP25P60880 206 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 RAD51Q06609 339 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 SNAPC2Q13487 334 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 ALFQ53S48 1182 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 ARMCX4Q5H9R4 360 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 OGFRL1Q5TC84 451 aaPredicted RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 AGAP7PQ5VUJ5 663 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 PLEKHG7Q6ZR37 379 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 PODNQ7Z5L7 613 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 OR8H1Q8NGG4 311 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 NKX2-3Q8TAU0 364 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 TBC1D15Q8TC07 691 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 PIWIL2Q8TC59 973 aaKnown RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 TMEM121Q9BTD3 319 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 FANCEQ9HB96 536 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 CHST7Q9NS84 486 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 FIS1Q9Y3D6 152 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 CDY2AQ9Y6F7 541 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 CDY1Q9Y6F8 540 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 STON1Q9Y6Q2 735 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 SAGE2PA6NJ88 616 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 USP17L5A8MUK1 530 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 E7ENX8 843 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 H3BNH8 94 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 CDK2AP1O14519 115 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 TFECO14948 347 aaPredicted RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 ZBTB5O15062 677 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 AXIN1O15169 862 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 ALOX15BO15296 676 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 SGTAO43765 313 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 KLRC4O43908 158 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 TBC1D4O60343 1298 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 PIAS1O75925 651 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 MARCKSL1P49006 195 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 NME5P56597 212 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 TRAF3Q13114 568 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 FRMD5Q7Z6J6 570 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF598Q86UK7 904 aaKnown RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 AMIGO1Q86WK6 493 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 SPATA18Q8TC71 538 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 VTI1AQ96AJ9 217 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 PHF21AQ96BD5 680 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 VPS39Q96JC1 886 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 C1orf21Q9H246 121 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 MTRRQ9UBK8 725 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 POLLQ9UGP5 575 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 PRPF19Q9UMS4 504 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms