RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 SERPINB8P50452 374 aa18.63■□□□□ 0.57
TDP2-202ENST00000378198 PPM1JQ5JR12 505 aa18.63■□□□□ 0.57
TDP2-202ENST00000378198 IQSEC1Q6DN90 963 aa18.63■□□□□ 0.57
TDP2-202ENST00000378198 AAGABQ6PD74 315 aa18.63■□□□□ 0.57
TDP2-202ENST00000378198 OSTM1Q86WC4 334 aa18.63■□□□□ 0.57
TDP2-202ENST00000378198 ABHD16BQ9H3Z7 469 aa18.63■□□□□ 0.57
TDP2-202ENST00000378198 SNX15Q9NRS6 342 aa18.63■□□□□ 0.57
TDP2-202ENST00000378198 PNPOQ9NVS9 261 aa18.63■□□□□ 0.57
TDP2-202ENST00000378198 KLHL8Q9P2G9 620 aaPredicted RBP18.63■□□□□ 0.57
TDP2-202ENST00000378198 UNCXA6NJT0 531 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 SOX4Q06945 474 aaPredicted RBP18.62■□□□□ 0.57
TDP2-202ENST00000378198 NME3Q13232 169 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 DPY19L2Q6NUT2 758 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 DPP9Q86TI2 863 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 SIX6OS1Q8N1H7 587 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.62■□□□□ 0.57
TDP2-202ENST00000378198 OR52K1Q8NGK4 314 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 SYT15Q9BQS2 421 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 NDE1Q9NXR1 346 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 BFARQ9NZS9 450 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 PIN4Q9Y237 131 aaKnown RBP18.62■□□□□ 0.57
TDP2-202ENST00000378198 NCAM2O15394 837 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 AP2A1O95782 977 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 FAM163BP0C2L3 166 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 SMIM10L2AP0DMW4 78 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 SMIM10L2BP0DMW5 78 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 PTPN1P18031 435 aaKnown RBP18.62■□□□□ 0.57
TDP2-202ENST00000378198 PTPN3P26045 913 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 COPAP53621 1224 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 LILRA4P59901 499 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 SYPL2Q5VXT5 272 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 CES3Q6UWW8 571 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 MAVSQ7Z434 540 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 DCLK2Q8N568 766 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 OR6Y1Q8NGX8 325 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 NTAN1Q96AB6 310 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 ZNF669Q96BR6 464 aaPredicted RBP18.62■□□□□ 0.57
TDP2-202ENST00000378198 FCRL3Q96P31 734 aaPredicted RBP18.62■□□□□ 0.57
TDP2-202ENST00000378198 GOLGA2P5Q9HBQ8 144 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 PIGVQ9NUD9 493 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 SCOCQ9UIL1 159 aa18.62■□□□□ 0.57
TDP2-202ENST00000378198 MBLAC1A4D2B0 266 aaPredicted RBP18.61■□□□□ 0.57
TDP2-202ENST00000378198 ERI2A8K979 691 aaKnown RBP18.61■□□□□ 0.57
TDP2-202ENST00000378198 ZNF195O14628 629 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 BEST1O76090 585 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 USP1O94782 785 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 MPOP05164 745 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 ADRA1BP35368 520 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 LIMK2P53671 638 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 ITGA9Q13797 1035 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 GSTA3Q16772 222 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 PDPK2PQ6A1A2 396 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 ADGRG6Q86SQ4 1221 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 TMEM135Q86UB9 458 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 UCMAQ8WVF2 138 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 MAML3Q96JK9 1138 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 DDX43Q9NXZ2 648 aaKnown RBP18.61■□□□□ 0.57
TDP2-202ENST00000378198 IL1RAPL1Q9NZN1 696 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 VANGL2Q9ULK5 521 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 MAGEA13PA6NCF6 341 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 MEI4A8MW99 385 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 PDHXO00330 501 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 CLDN5O00501 218 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 ERCC2P18074 760 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 SP100P23497 879 aaPredicted RBP18.61■□□□□ 0.57
TDP2-202ENST00000378198 HCAR3P49019 387 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 NDUFV1P49821 464 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 SLC25A3Q00325 362 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 R3HDM1Q15032 1099 aaKnown RBP18.61■□□□□ 0.57
TDP2-202ENST00000378198 LDLRAD1Q5T700 205 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 ATG14Q6ZNE5 492 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 CLEC20AQ6ZU45 233 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 PAQR9Q6ZVX9 377 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 STRA8Q7Z7C7 330 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 CMTM5Q96DZ9 223 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 BRD8Q9H0E9 1235 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 RNF39Q9H2S5 420 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 CASS4Q9NQ75 786 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 PCDHB12Q9Y5F1 795 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 CDY2AQ9Y6F7 541 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 CDY1Q9Y6F8 540 aa18.61■□□□□ 0.57
TDP2-202ENST00000378198 SHROOM3Q8TF72 1996 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 ARHGAP42A6NI28 874 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 KCNK1O00180 336 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 MTSS1O43312 755 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 CCNT2O60583 730 aaKnown RBP18.6■□□□□ 0.57
TDP2-202ENST00000378198 FBXO21O94952 628 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 TKTL1P51854 596 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 PPIDQ08752 370 aaKnown RBP18.6■□□□□ 0.57
TDP2-202ENST00000378198 SCAPQ12770 1279 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 GRIK3Q13003 919 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 SNX17Q15036 470 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 INTS6LQ5JSJ4 861 aaKnown RBP18.6■□□□□ 0.57
TDP2-202ENST00000378198 UBXN11Q5T124 520 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 TP53INP2Q8IXH6 220 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 KBTBD2Q8IY47 623 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 ZC3H15Q8WU90 426 aaKnown RBP18.6■□□□□ 0.57
TDP2-202ENST00000378198 SREK1Q8WXA9 508 aaKnown RBP18.6■□□□□ 0.57
TDP2-202ENST00000378198 SLC10A4Q96EP9 437 aa18.6■□□□□ 0.57
TDP2-202ENST00000378198 AGAP3Q96P47 875 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms