RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 FTLP02792 175 aaPredicted RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 RPL35P42766 123 aaKnown RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 CDH15P55291 814 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 QRICH1Q2TAL8 776 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 KIAA1841Q6NSI8 718 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 UGT3A1Q6NUS8 523 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 TMEM179Q6ZVK1 233 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 GPR180Q86V85 440 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 ELOVL6Q9H5J4 265 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 RGS17Q9UGC6 210 aaPredicted RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 E2F3O00716 465 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 NBNO60934 754 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 SLC4A1P02730 911 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 ITGB3P05106 788 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 HOXA13P31271 388 aaPredicted RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 NLRP11P59045 1033 aaKnown RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 KCTD19Q17RG1 926 aaPredicted RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 AGAP7PQ5VUJ5 663 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 ALYREFQ86V81 257 aaKnown RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 AMIGO1Q86WK6 493 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 SFRP1Q8N474 314 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 C12orf50Q8NA57 414 aaPredicted RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 XXYLT1Q8NBI6 393 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 BPIFB6Q8NFQ5 453 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 CNDP1Q96KN2 507 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 SLC13A1Q9BZW2 595 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 SEMA6AQ9H2E6 1030 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 CHMP1AQ9HD42 196 aaPredicted RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 PAQR5Q9NXK6 330 aaPredicted RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 NAGPAQ9UK23 515 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 ORC6Q9Y5N6 252 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 KCNQ2O43526 872 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 RFPL2O75678 378 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 INPP5AQ14642 412 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 ABRAXAS1Q6UWZ7 409 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 SLC4A11Q8NBS3 891 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 TNIP3Q96KP6 325 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 UROC1Q96N76 676 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 RMDN3Q96TC7 470 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 MTMR4Q9NYA4 1195 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 KIF17Q9P2E2 1029 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 SLC24A2Q9UI40 661 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 AGO2Q9UKV8 859 aaKnown RBP12.01□□□□□ -0.49
NPHP4-202ENST00000378161 H0YIN7 160 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 HSPA4LO95757 839 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 CTRB1P17538 263 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 PRKCIP41743 596 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 ATP6V0D1P61421 351 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 AARS2Q5JTZ9 985 aaKnown RBP12.01□□□□□ -0.49
NPHP4-202ENST00000378161 BROXQ5VW32 411 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 CTRB2Q6GPI1 263 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 IGFN1Q86VF2 1251 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 PSD2Q9BQI7 771 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 ASPSCR1Q9BZE9 553 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 C6orf62Q9GZU0 229 aaPredicted RBP12.01□□□□□ -0.49
NPHP4-202ENST00000378161 INTS2Q9H0H0 1204 aaKnown RBP12.01□□□□□ -0.49
NPHP4-202ENST00000378161 TRIT1Q9H3H1 467 aaKnown RBP12.01□□□□□ -0.49
NPHP4-202ENST00000378161 EPS8L2Q9H6S3 715 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 WASH6PQ9NQA3 447 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 SLC38A7Q9NVC3 462 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 MLXQ9UH92 298 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 SALL4Q9UJQ4 1053 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 SIGLEC1Q9BZZ2 1709 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 A0A1B0GW55 424 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 H0YJX3 145 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 PPEF1O14829 653 aaPredicted RBP12.01□□□□□ -0.49
NPHP4-202ENST00000378161 DNAJA2O60884 412 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 DUX4L2P0CJ85 424 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 DUX4L3P0CJ86 424 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 DUX4L4P0CJ87 422 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 DUX4L5P0CJ88 424 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 DUX4L6P0CJ89 424 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 DUX4L7P0CJ90 424 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 PRDX6P30041 224 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 GDI2P50395 445 aaKnown RBP12.01□□□□□ -0.49
NPHP4-202ENST00000378161 NPEPPSP55786 919 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 OR2B6P58173 313 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 SHROOM1Q2M3G4 852 aaPredicted RBP12.01□□□□□ -0.49
NPHP4-202ENST00000378161 FRMD7Q6ZUT3 714 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 KRT73Q86Y46 540 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 SPATA20Q8TB22 786 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 SPATA18Q8TC71 538 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 TDRD1Q9BXT4 1180 aaKnown RBP12.01□□□□□ -0.49
NPHP4-202ENST00000378161 WDR70Q9NW82 654 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 DUX4Q9UBX2 424 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 BAZ2BQ9UIF8 2168 aaKnown RBP12.01□□□□□ -0.49
NPHP4-202ENST00000378161 C3P01024 1663 aa12.01□□□□□ -0.49
NPHP4-202ENST00000378161 SOBPA7XYQ1 873 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 PRSS44E7EML9 344 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 GDF11O95390 407 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 STAT3P40763 770 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 OR3A3P47888 321 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 WDR4P57081 412 aaKnown RBP12□□□□□ -0.49
NPHP4-202ENST00000378161 GPR85P60893 370 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 ZNF543Q08ER8 600 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 CRTC3Q6UUV7 619 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 PCGF5Q86SE9 256 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 TRABD2AQ86V40 505 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 LRRC71Q8N4P6 559 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 ADAMTS16Q8TE57 1224 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms