RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 GOLGA8NF8WBI6 632 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 AIM2O14862 343 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 SMIM18P0DKX4 95 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 SERPINB5P36952 375 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 MTTPP55157 894 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 KLF10Q13118 480 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 GK3PQ14409 553 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 LRRC23Q53EV4 343 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 PYROXD2Q8N2H3 581 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 ACMSDQ8TDX5 336 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 CLEC4CQ8WTT0 213 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 MPP4Q96JB8 637 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 DNAJC1Q96KC8 554 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 LENG8Q96PV6 779 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 OR52B2Q96RD2 323 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 MTMR10Q9NXD2 777 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 BARX2Q9UMQ3 279 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 DNAH12Q6ZR08 3092 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 MYOCOSA0A1B0GUC4 107 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 MANSC4A6NHS7 340 aaPredicted RBP14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 CPA3P15088 417 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 GRK2P25098 689 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 FDFT1P37268 417 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 ATXN3P54252 364 aaPredicted RBP14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 TBC1D25Q3MII6 688 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 MAP3K21Q5TCX8 1036 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 STEAP4Q687X5 459 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 DPP9Q86TI2 863 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 TTC30AQ86WT1 665 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 IRAK4Q9NWZ3 460 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 DTLQ9NZJ0 730 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 HESX1Q9UBX0 185 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 ARHGAP26Q9UNA1 814 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 CASQ2O14958 399 aaPredicted RBP14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 PAPSS1O43252 624 aaPredicted RBP14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 IL18RAPO95256 599 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 PMLP29590 882 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 HARS2P49590 506 aaKnown RBP14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 XIAPP98170 497 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 SLC6A3Q01959 620 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 DEUP1Q05D60 604 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 PPM1LQ5SGD2 360 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 SDCCAG8Q86SQ7 713 aaPredicted RBP14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 ACOT1Q86TX2 421 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 HACE1Q8IYU2 909 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 COLGALT1Q8NBJ5 622 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 NPLOC4Q8TAT6 608 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 GTF3C2Q8WUA4 911 aaPredicted RBP14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 CDKL2Q92772 493 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 DCUN1D1Q96GG9 259 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 CPB2Q96IY4 423 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 GCOM2Q9BZD3 368 aaPredicted RBP14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 C2orf40Q9H1Z8 148 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 SYBUQ9NX95 663 aa14.46□□□□□ -0.09
CLCNKA-202ENST00000375692 ALOX15P16050 662 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 INHBCP55103 352 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 MBTD1Q05BQ5 628 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 DBN1Q16643 649 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 OGFRL1Q5TC84 451 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 RBM44Q6ZP01 1051 aaKnown RBP14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 RNF148Q8N7C7 305 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 FAM81AQ8TBF8 368 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 HTR3CQ8WXA8 447 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 HIC2Q96JB3 615 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 QKIQ96PU8 341 aaKnown RBP eCLIP14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 CSPG4P5Q96PW8 444 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 KCTD15Q96SI1 283 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 WDR55Q9H6Y2 383 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 CYP3A43Q9HB55 503 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 HTTP42858 3142 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 DPYSL4O14531 572 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 MDM4O15151 490 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 VILLO15195 856 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 DNAJA2O60884 412 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 DGKIO75912 1065 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 HSPA4LO95757 839 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 SNAI1O95863 264 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 TFAP2AP05549 437 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 TXNP10599 105 aaKnown RBP14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 GOT1P17174 413 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 DLG2Q15700 870 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 SLC10A6Q3KNW5 377 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 PABPC1LQ4VXU2 614 aaKnown RBP14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 PRAMEF19Q5SWL8 479 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 PAOXQ6QHF9 649 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 EPGNQ6UW88 154 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 CYS1Q717R9 158 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 PLEKHH3Q7Z736 793 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 PQLC1Q8N2U9 271 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 CCDC185Q8N715 623 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 ADAM32Q8TC27 787 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 TBCBQ99426 244 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 NT5C1AQ9BXI3 368 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 SEPT10Q9P0V9 454 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 SSX2IPQ9Y2D8 614 aa14.45□□□□□ -0.1
CLCNKA-202ENST00000375692 IGKV6-21A0A0C4DH24 114 aa14.44□□□□□ -0.1
CLCNKA-202ENST00000375692 TMEM88BA6NKF7 163 aa14.44□□□□□ -0.1
CLCNKA-202ENST00000375692 NEMP1O14524 444 aa14.44□□□□□ -0.1
CLCNKA-202ENST00000375692 STRNO43815 780 aa14.44□□□□□ -0.1
CLCNKA-202ENST00000375692 CREB3O43889 395 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms