RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 MYBPC1Q00872 1141 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 OGFRL1Q5TC84 451 aaPredicted RBP18.17■□□□□ 0.5
VPS26A-202ENST00000373382 IER5Q5VY09 327 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 SLC9A4Q6AI14 798 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 SPNS2Q8IVW8 549 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 PCDH20Q8N6Y1 951 aaKnown RBP18.17■□□□□ 0.5
VPS26A-202ENST00000373382 SGF29Q96ES7 293 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 BTBD9Q96Q07 612 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 NT5C1AQ9BXI3 368 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 NIFKQ9BYG3 293 aaKnown RBP18.17■□□□□ 0.5
VPS26A-202ENST00000373382 SLC39A10Q9ULF5 831 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 ZNF195O14628 629 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 ATP5BP06576 529 aaKnown RBP18.17■□□□□ 0.5
VPS26A-202ENST00000373382 FAM58BPP0C7Q3 252 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 CXCL9Q07325 125 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 CYLC2Q14093 348 aaPredicted RBP18.17■□□□□ 0.5
VPS26A-202ENST00000373382 HSDL1Q3SXM5 330 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 LILRA2Q8N149 483 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 SIKE1Q9BRV8 207 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 BCO2Q9BYV7 579 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 GCOM2Q9BZD3 368 aaPredicted RBP18.17■□□□□ 0.5
VPS26A-202ENST00000373382 TASP1Q9H6P5 420 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 QTRT2Q9H974 415 aaKnown RBP18.17■□□□□ 0.5
VPS26A-202ENST00000373382 PTTG2Q9NZH5 202 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 UBP1Q9NZI7 540 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 HSFX1Q9UBD0 423 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 HESX1Q9UBX0 185 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.17■□□□□ 0.5
VPS26A-202ENST00000373382 TK2O00142 265 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 B4GALT4O60513 344 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 FARP2O94887 1054 aaPredicted RBP18.17■□□□□ 0.5
VPS26A-202ENST00000373382 PRKCGP05129 697 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 HNRNPCP07910 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
VPS26A-202ENST00000373382 THRAP10827 490 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 CNTFP26441 200 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 SH2D4BQ5SQS7 431 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 LAYNQ6UX15 382 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 RTKNQ9BST9 563 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 GATA5Q9BWX5 397 aaPredicted RBP18.17■□□□□ 0.5
VPS26A-202ENST00000373382 CHCHD3Q9NX63 227 aaKnown RBP18.17■□□□□ 0.5
VPS26A-202ENST00000373382 NDUFA13Q9P0J0 144 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 STK39Q9UEW8 545 aa18.17■□□□□ 0.5
VPS26A-202ENST00000373382 PHGDHO43175 533 aaKnown RBP18.16■□□□□ 0.5
VPS26A-202ENST00000373382 GCATO75600 419 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 TNFAIP8O95379 198 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 POLBP06746 335 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 NAGLUP54802 743 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 PRAMEP78395 509 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 LSM12Q3MHD2 195 aaKnown RBP18.16■□□□□ 0.5
VPS26A-202ENST00000373382 TIFABQ6ZNK6 161 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 TSHZ1Q6ZSZ6 1077 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 ZNF280CQ8ND82 737 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 ACVR1CQ8NER5 493 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 OR6B3Q8NGW1 331 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 SEPT1Q8WYJ6 367 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 CSPG4P5Q96PW8 444 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 CCT7Q99832 543 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 SLC4A5Q9BY07 1137 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 FBXO21O94952 628 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 IQCF3P0C7M6 154 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 GP5P40197 560 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 ARL4AP40617 200 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 XIAPP98170 497 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 CDK18Q07002 472 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 IFRD2Q12894 506 aaPredicted RBP18.16■□□□□ 0.5
VPS26A-202ENST00000373382 IL31Q6EBC2 164 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 EFCAB12Q6NXP0 572 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 NCAPG2Q86XI2 1143 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 GRIN3AQ8TCU5 1115 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 SREK1Q8WXA9 508 aaKnown RBP18.16■□□□□ 0.5
VPS26A-202ENST00000373382 RTP4Q96DX8 246 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 CERS2Q96G23 380 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 KCTD15Q96SI1 283 aaPredicted RBP18.16■□□□□ 0.5
VPS26A-202ENST00000373382 ILKAPQ9H0C8 392 aaPredicted RBP18.16■□□□□ 0.5
VPS26A-202ENST00000373382 TRPV6Q9H1D0 765 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 STN1Q9H668 368 aaKnown RBP18.16■□□□□ 0.5
VPS26A-202ENST00000373382 BARX2Q9UMQ3 279 aaPredicted RBP18.16■□□□□ 0.5
VPS26A-202ENST00000373382 TBC1D30Q9Y2I9 924 aa18.16■□□□□ 0.5
VPS26A-202ENST00000373382 ACKR2O00590 384 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 PIGNO95427 931 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 TPSB2P20231 275 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 MAGEA3P43357 314 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 ADARP55265 1226 aaKnown RBP18.15■□□□□ 0.5
VPS26A-202ENST00000373382 CEACAM7Q14002 265 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 TARBP2Q15633 366 aaKnown RBP18.15■□□□□ 0.5
VPS26A-202ENST00000373382 TPSAB1Q15661 275 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 FSTL4Q6MZW2 842 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 ILDR2Q71H61 639 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 TRIM74Q86UV6 250 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 TRIM73Q86UV7 250 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 TMIGD2Q96BF3 282 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 PPWD1Q96BP3 646 aaKnown RBP18.15■□□□□ 0.5
VPS26A-202ENST00000373382 FERMT1Q9BQL6 677 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 FAM96AQ9H5X1 160 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 WDR41Q9HAD4 459 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 C6orf203Q9P0P8 240 aaPredicted RBP18.15■□□□□ 0.5
VPS26A-202ENST00000373382 KLHL8Q9P2G9 620 aaPredicted RBP18.15■□□□□ 0.5
VPS26A-202ENST00000373382 LY75O60449 1722 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 PGAM1P18669 254 aa18.15■□□□□ 0.5
VPS26A-202ENST00000373382 SLC6A3Q01959 620 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms