RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 MYCLP1P12525 358 aaPredicted RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 PTGIRP43119 386 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 PITX1P78337 314 aaPredicted RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 ENPEPQ07075 957 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 C16orf72Q14CZ0 275 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 MTFR1Q15390 333 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 GRAMD1BQ3KR37 738 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 SYPL2Q5VXT5 272 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 SLC24A5Q71RS6 500 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 MARK2Q7KZI7 788 aaKnown RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 PCGF5Q86SE9 256 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 SERINC5Q86VE9 423 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 ZNF280BQ86YH2 543 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 DDHD1Q8NEL9 900 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 RNF157Q96PX1 679 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 UNC93B1Q9H1C4 597 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 POPDC2Q9HBU9 364 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 TRPC7Q9HCX4 862 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 NDE1Q9NXR1 346 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 TMEM59LQ9UK28 342 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 CROTQ9UKG9 612 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 SLC12A4Q9UP95 1085 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 ARHGAP42A6NI28 874 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 CASQ2O14958 399 aaPredicted RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 CKBP12277 381 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 RPL17P18621 184 aaKnown RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 CYP2C18P33260 490 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 RPL22P35268 128 aaKnown RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 TM4SF4P48230 202 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 GDF10P55107 478 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 CRADDP78560 199 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 MRPS5P82675 430 aaKnown RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 PDK2Q15119 407 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 PCSK7Q16549 785 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 UBXN11Q5T124 520 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 TRMT10CQ7L0Y3 403 aaKnown RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 IFNLR1Q8IU57 520 aaPredicted RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 PPIL6Q8IXY8 311 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 TOP6BLQ8N6T0 577 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.41□□□□□ -0.92e-6■■□□□ 12.4
CALD1-202ENST00000361901 CD101Q93033 1021 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 FBXO32Q969P5 355 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 HSFY1Q96LI6 401 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 CHST12Q9NRB3 414 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 SMYD2Q9NRG4 433 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 ZC3H7BQ9UGR2 993 aaKnown RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 TRIP12Q14669 1992 aaPredicted RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 ZNFX1Q9P2E3 1918 aaKnown RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 APOC4-APOC2K7ER74 178 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 MDM4O15151 490 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 APOC2P02655 101 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 ETFBP38117 255 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 ISLR2Q6UXK2 745 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 IZUMO2Q6UXV1 221 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 LRRC74BQ6ZQY2 392 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 LRRC8DQ7L1W4 858 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 PDCD6IPQ8WUM4 868 aaKnown RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 TFB1MQ8WVM0 346 aaKnown RBP9.41□□□□□ -0.9
CALD1-202ENST00000361901 TMEM209Q96SK2 561 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 COLEC11Q9BWP8 271 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 HIPK3Q9H422 1215 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 RXFP1Q9HBX9 757 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 SELENONQ9NZV5 590 aa9.41□□□□□ -0.9
CALD1-202ENST00000361901 GOLGA8CPA6NN73 597 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 DNALI1O14645 258 aaPredicted RBP9.4□□□□□ -0.9
CALD1-202ENST00000361901 PRRG1O14668 218 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 TTC4O95801 387 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 JCHAINP01591 159 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 ZNF252P-AS1Q0IIN9 211 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 FASTKD3Q14CZ7 662 aaKnown RBP9.4□□□□□ -0.9
CALD1-202ENST00000361901 LGSNQ5TDP6 509 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 CES3Q6UWW8 571 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 TTC17Q96AE7 1141 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 TMEM169Q96HH4 297 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 XAB2Q9HCS7 855 aaKnown RBP9.4□□□□□ -0.9
CALD1-202ENST00000361901 TBC1D23Q9NUY8 699 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 NINJ2Q9NZG7 142 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 COMMD10Q9Y6G5 202 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 GOLGA4Q13439 2230 aaKnown RBP9.4□□□□□ -0.9
CALD1-202ENST00000361901 PIRO00625 290 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 SNX3O60493 162 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 MGEA5O60502 916 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 DCTN3O75935 186 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 ITGB1P05556 798 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 STIP1P31948 543 aaKnown RBP9.4□□□□□ -0.9
CALD1-202ENST00000361901 NOS2P35228 1153 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 PTP4A2Q12974 167 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 PTK6Q13882 451 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 LRRC38Q5VT99 294 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 BBS12Q6ZW61 710 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 KIAA2013Q8IYS2 634 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 TMEM86AQ8N2M4 240 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 MCRS1Q96EZ8 462 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 FAM161BQ96MY7 647 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 TSNARE1Q96NA8 513 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 ANLNQ9NQW6 1124 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 PAK5Q9P286 719 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 NENFQ9UMX5 172 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 LRRC42Q9Y546 428 aa9.4□□□□□ -0.9
CALD1-202ENST00000361901 ASB3Q9Y575 518 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms