RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MAP2K7O14733 419 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 SCAMP3O14828 347 aaKnown RBP18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 RBL1P28749 1068 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 C5orf22Q49AR2 442 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 SLC45A4Q5BKX6 768 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 LRRC31Q6UY01 552 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 Q6ZNB5 142 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 ARHGAP12Q8IWW6 846 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 RTL3Q8N8U3 475 aaKnown RBP18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 LGMNQ99538 433 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 ZYG11BQ9C0D3 744 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 SMG9Q9H0W8 520 aaKnown RBP18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 NSUN3Q9H649 340 aaKnown RBP18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 SFXN1Q9H9B4 322 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 WHRNQ9P202 907 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 ZNF212Q9UDV6 495 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 STOML2Q9UJZ1 356 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 CLUHO75153 1309 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 LINC01565O15544 149 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 VAV1P15498 845 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 RHOQP17081 205 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 DDX6P26196 483 aaKnown RBP eCLIP18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 VPS41P49754 854 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 GALNT2Q10471 571 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 PRKD1Q15139 912 aaPredicted RBP18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 ZDHHC24Q6UX98 284 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 CIR1Q86X95 450 aaPredicted RBP18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 LGI2Q8N0V4 545 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 RSAD2Q8WXG1 361 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 CELF6Q96J87 481 aaKnown RBP18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 PRICKLE1Q96MT3 831 aaPredicted RBP18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 RPRD1AQ96P16 312 aaPredicted RBP18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 NEUROG2Q9H2A3 272 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 PRDM12Q9H4Q4 367 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 TASP1Q9H6P5 420 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 ASIC3Q9UHC3 531 aa18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 PRRC2BQ5JSZ5 2229 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 F5H5T6 163 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 IFNB1P01574 187 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 FAM153BP0C7A2 387 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 CEBPBP17676 345 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 ITIH2P19823 946 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 STIP1P31948 543 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 SERPINB6P35237 376 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 CASP8Q14790 479 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 PDK1Q15118 436 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 FAM153CQ494X1 144 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 ADGRF1Q5T601 910 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 AFMIDQ63HM1 303 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 BZW1Q7L1Q6 419 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 TFAP2DQ7Z6R9 452 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 CDKL3Q8IVW4 592 aaPredicted RBP18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 CMTM8Q8IZV2 173 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 ART4Q93070 314 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 PPP2R3CQ969Q6 453 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 RTP4Q96DX8 246 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 SNF8Q96H20 258 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 NOL6Q9H6R4 1146 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 PIDD1Q9HB75 910 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 PCDH9Q9HC56 1237 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 DZANK1Q9NVP4 752 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 TMEM248Q9NWD8 314 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 CFAP97Q9P2B7 532 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 FAM153AQ9UHL3 310 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 ARHGAP26Q9UNA1 814 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 CCL26Q9Y258 94 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 RAD54BQ9Y620 910 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 CHD5Q8TDI0 1954 aa18.65■□□□□ 0.58
SMARCD3-202ENST00000356800 HACD1B0YJ81 288 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 TRDMT1O14717 391 aaKnown RBP18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 TP73O15350 636 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 KCNN4O15554 427 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 SASH3O75995 380 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 SGSHP51688 502 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 CALCOCO2Q13137 446 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 LRIT3Q3SXY7 679 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 ARHGAP15Q53QZ3 475 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 TMEM184AQ6ZMB5 413 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 CFAP52Q8N1V2 620 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 MREGQ8N565 214 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 EFHBQ8N7U6 833 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 ITFG1Q8TB96 612 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 TFB1MQ8WVM0 346 aaKnown RBP18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 ING5Q8WYH8 240 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 ZSWIM3Q96MP5 696 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 VIPAS39Q9H9C1 493 aa18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 NUP210Q8TEM1 1887 aaPredicted RBP18.64■□□□□ 0.57
SMARCD3-202ENST00000356800 CFAP69A5D8W1 941 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 LEFTY2O00292 366 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 GFRA2O00451 464 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 LATS1O95835 1130 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 RPL22P35268 128 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 ADCY8P40145 1251 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 TNNT3P45378 269 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 PLTPP55058 493 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 RARS2Q5T160 578 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 HTR3DQ70Z44 454 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 BBOF1Q8ND07 529 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 RIN3Q8TB24 985 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 FBXO25Q8TCJ0 367 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms