RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 MX2P20592 715 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 PTPN3P26045 913 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 PDIA2Q13087 525 aaKnown RBP21.77■■□□□ 1.08
VRK2-201ENST00000340157 TAF12Q16514 161 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 ALFQ53S48 1182 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 C9orf50Q5SZB4 431 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 FAM109BQ6ICB4 259 aaPredicted RBP21.77■■□□□ 1.08
VRK2-201ENST00000340157 ARHGEF18Q6ZSZ5 1173 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 CENPUQ71F23 418 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 AGGF1Q8N302 714 aaeCLIP21.77■■□□□ 1.08
VRK2-201ENST00000340157 SPPL3Q8TCT6 385 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 PHACTR1Q9C0D0 580 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 SLC39A8Q9C0K1 460 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 PPARGC1AQ9UBK2 798 aaKnown RBP21.77■■□□□ 1.08
VRK2-201ENST00000340157 ZNF212Q9UDV6 495 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 GOLGA6L7A0A1B0GV03 622 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 GOLGA8KD6RF30 607 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 OPHN1O60890 802 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 F11P03951 625 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 APRTP07741 180 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 KPNA1P52294 538 aaPredicted RBP21.76■■□□□ 1.07
VRK2-201ENST00000340157 EIF3BP55884 814 aaKnown RBP21.76■■□□□ 1.07
VRK2-201ENST00000340157 ARL4CP56559 192 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 SEMA5AQ13591 1074 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 NUGGCQ68CJ6 796 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 TADA2BQ86TJ2 420 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 ZBED8Q8IZ13 594 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 BRD8Q9H0E9 1235 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 VPS18Q9P253 973 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 SLC12A6Q9UHW9 1150 aa21.76■■□□□ 1.07
VRK2-201ENST00000340157 CDH23Q9H251 3354 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 C2orf71A6NGG8 1288 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 GRXCR1A8MXD5 290 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 F5H423 210 aaPredicted RBP21.75■■□□□ 1.07
VRK2-201ENST00000340157 ZBTB17Q13105 803 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 PLPP4Q5VZY2 271 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 CEP128Q6ZU80 1094 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 ZNF534Q76KX8 674 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 GOLGA6L1Q8N7Z2 621 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 POF1BQ8WVV4 589 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 LBHD1Q9BQE6 289 aaPredicted RBP21.75■■□□□ 1.07
VRK2-201ENST00000340157 HTATIP2Q9BUP3 242 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 ENTPD7Q9NQZ7 604 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 CHD5Q8TDI0 1954 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 ADH1AP07327 375 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 IFFO1Q0D2I5 559 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 CAMK1Q14012 370 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 KCTD16Q68DU8 428 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 TFAP2DQ7Z6R9 452 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 CAND1Q86VP6 1230 aaKnown RBP21.75■■□□□ 1.07
VRK2-201ENST00000340157 SH2D3CQ8N5H7 860 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 MRPL43Q8N983 215 aaKnown RBP21.75■■□□□ 1.07
VRK2-201ENST00000340157 WBP2Q969T9 261 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 ZNF419Q96HQ0 510 aaPredicted RBP21.75■■□□□ 1.07
VRK2-201ENST00000340157 SERPINB12Q96P63 405 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 GORASP1Q9BQQ3 440 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 ZYG11BQ9C0D3 744 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 NACA2Q9H009 215 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 GKN1Q9NS71 199 aa21.75■■□□□ 1.07
VRK2-201ENST00000340157 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.75■■□□□ 1.07
VRK2-201ENST00000340157 CLUHO75153 1309 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 DRGXA6NNA5 263 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 DFFAO00273 331 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 NRG2O14511 850 aaPredicted RBP21.74■■□□□ 1.07
VRK2-201ENST00000340157 AVILO75366 819 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 KLKB1P03952 638 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 RHOQP17081 205 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 PSMB4P28070 264 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 SLC6A4P31645 630 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 PPP3CCP48454 512 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 CBLBQ13191 982 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 FAM133BQ5BKY9 247 aaKnown RBP21.74■■□□□ 1.07
VRK2-201ENST00000340157 ANKMY2Q8IV38 441 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 LZTR1Q8N653 840 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 EPS8L3Q8TE67 593 aaKnown RBP21.74■■□□□ 1.07
VRK2-201ENST00000340157 EXOC4Q96A65 974 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 TSGA13Q96PP4 275 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 SLC22A12Q96S37 553 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 TMEM109Q9BVC6 243 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 LRRC3Q9BY71 257 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 MTIF3Q9H2K0 278 aaKnown RBP21.74■■□□□ 1.07
VRK2-201ENST00000340157 TMEM248Q9NWD8 314 aa21.74■■□□□ 1.07
VRK2-201ENST00000340157 UXTQ9UBK9 157 aaPredicted RBP21.74■■□□□ 1.07
VRK2-201ENST00000340157 C5orf67F2Z3F1 127 aa21.73■■□□□ 1.07
VRK2-201ENST00000340157 EIF3HO15372 352 aaKnown RBP eCLIP21.73■■□□□ 1.07
VRK2-201ENST00000340157 STC2O76061 302 aa21.73■■□□□ 1.07
VRK2-201ENST00000340157 STK10O94804 968 aaKnown RBP21.73■■□□□ 1.07
VRK2-201ENST00000340157 MYZAPP0CAP1 466 aa21.73■■□□□ 1.07
VRK2-201ENST00000340157 TPSB2P20231 275 aa21.73■■□□□ 1.07
VRK2-201ENST00000340157 CD68P34810 354 aaPredicted RBP21.73■■□□□ 1.07
VRK2-201ENST00000340157 TPSAB1Q15661 275 aa21.73■■□□□ 1.07
VRK2-201ENST00000340157 KRT71Q3SY84 523 aa21.73■■□□□ 1.07
VRK2-201ENST00000340157 CHSY1Q86X52 802 aa21.73■■□□□ 1.07
VRK2-201ENST00000340157 CIR1Q86X95 450 aaPredicted RBP21.73■■□□□ 1.07
VRK2-201ENST00000340157 TMC8Q8IU68 726 aa21.73■■□□□ 1.07
VRK2-201ENST00000340157 IGDCC3Q8IVU1 814 aa21.73■■□□□ 1.07
VRK2-201ENST00000340157 KREMEN2Q8NCW0 462 aa21.73■■□□□ 1.07
VRK2-201ENST00000340157 MCUQ8NE86 351 aa21.73■■□□□ 1.07
VRK2-201ENST00000340157 ZFRQ96KR1 1074 aaKnown RBP21.73■■□□□ 1.07
VRK2-201ENST00000340157 KLF16Q9BXK1 252 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms