RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 DDI1Q8WTU0 396 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 P2RY11Q96G91 374 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 EBF3Q9H4W6 596 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 ECT2Q9H8V3 914 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 TTC7AQ9ULT0 858 aaPredicted RBP18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 CEP104O60308 925 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 ADH5P11766 374 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 GAD2Q05329 585 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 NR1H3Q13133 447 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 RUNX3Q13761 415 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 PAFAH1B3Q15102 231 aaKnown RBP18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 TMCO3Q6UWJ1 677 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 CIR1Q86X95 450 aaPredicted RBP18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 SLC13A5Q86YT5 568 aaPredicted RBP18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 COG1Q8WTW3 980 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 HERPUD2Q9BSE4 406 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 BBS2Q9BXC9 721 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 BRD9Q9H8M2 597 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 TRPV5Q9NQA5 729 aa18.4■□□□□ 0.54
SDCBP2-201ENST00000339987 CUL9Q8IWT3 2517 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 C19orf67A6NJJ6 358 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 APOL1O14791 398 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 TJP3O95049 919 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 LUC7L3O95232 432 aaKnown RBP18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 KLF1Q13351 362 aaPredicted RBP18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 ANO4Q32M45 955 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 KAZNQ674X7 775 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 NCBP2-AS2Q69YL0 99 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 LZTR1Q8N653 840 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 ZNF557Q8N988 423 aaPredicted RBP18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 ACTRT1Q8TDG2 376 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 ZNF592Q92610 1267 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 ASB2Q96Q27 587 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 HEMGNQ9BXL5 484 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 ETNK2Q9NVF9 386 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 TBC1D30Q9Y2I9 924 aa18.39■□□□□ 0.53
SDCBP2-201ENST00000339987 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 NEDD8-MDP1E9PL57 170 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 CACNG3O60359 315 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 CST8O60676 142 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 ASGR2P07307 311 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 BMP1P13497 986 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 TYRP14679 529 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 TGM2P21980 687 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 SERPINB6P35237 376 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 TNK2Q07912 1038 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 ADCY2Q08462 1091 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 ZNF177Q13360 481 aaPredicted RBP18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 LLGL1Q15334 1064 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 ITPRIPL2Q3MIP1 535 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 TFAP2DQ7Z6R9 452 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 SETD3Q86TU7 594 aaPredicted RBP18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 UMODL1-AS1Q8N2C9 162 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 PLD5Q8N7P1 536 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 DNASE1L2Q92874 299 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 SLC2A11Q9BYW1 496 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 KLC2Q9H0B6 622 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 PLK2Q9NYY3 685 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 RNF14Q9UBS8 474 aa18.38■□□□□ 0.53
SDCBP2-201ENST00000339987 OTOL1A6NHN0 477 aaPredicted RBP18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 PGRMC1O00264 195 aaKnown RBP18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 ZNF185O15231 689 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 FGGP02679 453 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 OR1E1P30953 314 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 TDGQ13569 410 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 TUBB2AQ13885 445 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 GAB4Q2WGN9 574 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 C6orf118Q5T5N4 469 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 AFMIDQ63HM1 303 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 ZNF783Q6ZMS7 281 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 CREG2Q8IUH2 290 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 MFN1Q8IWA4 741 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 CCDC117Q8IWD4 279 aaPredicted RBP18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 NPWQ8N729 165 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 FIBINQ8TAL6 211 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 MAIP1Q8WWC4 291 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 BHMTQ93088 406 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 XPO6Q96QU8 1125 aaKnown RBP18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 NAP1L3Q99457 506 aaPredicted RBP18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 TUBB2BQ9BVA1 445 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 FBXO10Q9UK96 956 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 MFHAS1Q9Y4C4 1052 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 RAD54BQ9Y620 910 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 COL4A3Q01955 1670 aa18.37■□□□□ 0.53
SDCBP2-201ENST00000339987 ILVBLA1L0T0 632 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 H0Y626 953 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 APOC4-APOC2K7ER74 178 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 APOC2P02655 101 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 NDST2P52849 883 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 OXCT1P55809 520 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 YBEYP58557 167 aaPredicted RBP18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 DYNLT1P63172 113 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 CDH18Q13634 790 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 CXorf57Q6NSI4 855 aaKnown RBP18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 ETFBKMTQ8IXQ9 262 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 CARNMT1Q8N4J0 409 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 CSGALNACT1Q8TDX6 532 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 MS4A14Q96JA4 679 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 SLC2A4RGQ9NR83 387 aa18.36■□□□□ 0.53
SDCBP2-201ENST00000339987 NDFIP2Q9NV92 336 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms