RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 IFFO1Q0D2I5 559 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 PDIA2Q13087 525 aaKnown RBP15.88■□□□□ 0.13
LIMS1-202ENST00000338045 FASTKD3Q14CZ7 662 aaKnown RBP15.88■□□□□ 0.13
LIMS1-202ENST00000338045 TPSAB1Q15661 275 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 MSS51Q4VC12 460 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 FAXCQ5TGI0 409 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 LRRC31Q6UY01 552 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 PDIK1LQ8N165 341 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 ZNF567Q8N184 647 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 ZSCAN18Q8TBC5 510 aaPredicted RBP15.88■□□□□ 0.13
LIMS1-202ENST00000338045 SPPL3Q8TCT6 385 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 CELF6Q96J87 481 aaKnown RBP15.88■□□□□ 0.13
LIMS1-202ENST00000338045 TCF25Q9BQ70 676 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 LBHD1Q9BQE6 289 aaPredicted RBP15.88■□□□□ 0.13
LIMS1-202ENST00000338045 PLCD4Q9BRC7 762 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 ZYG11BQ9C0D3 744 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 IL21Q9HBE4 155 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 NDFIP2Q9NV92 336 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 DONSONQ9NYP3 566 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 MPP6Q9NZW5 540 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 IGSF9Q9P2J2 1179 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 NUP205Q92621 2012 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 GOLGA6L10A6NI86 522 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 KCNK1O00180 336 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 POLR3GO15318 223 aaPredicted RBP15.87■□□□□ 0.13
LIMS1-202ENST00000338045 F11P03951 625 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 APRTP07741 180 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 KCNQ1P51787 676 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 UBE3AQ05086 875 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 PARP6Q2NL67 630 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 NADSYN1Q6IA69 706 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 FBXL22Q6P050 247 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 CROCCP2Q86T23 111 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 LRRC49Q8IUZ0 686 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 CCDC13Q8IYE1 715 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 UMODL1-AS1Q8N2C9 162 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 MRPL43Q8N983 215 aaKnown RBP15.87■□□□□ 0.13
LIMS1-202ENST00000338045 VAT1Q99536 393 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 WDR83Q9BRX9 315 aaKnown RBP15.87■□□□□ 0.13
LIMS1-202ENST00000338045 EMILIN2Q9BXX0 1053 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 ROPN1BQ9BZX4 212 aaPredicted RBP15.87■□□□□ 0.13
LIMS1-202ENST00000338045 ROPN1Q9HAT0 212 aaPredicted RBP15.87■□□□□ 0.13
LIMS1-202ENST00000338045 LRRC4CQ9HCJ2 640 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 ZNF334Q9HCZ1 680 aaPredicted RBP15.87■□□□□ 0.13
LIMS1-202ENST00000338045 ALG13Q9NP73 1137 aaKnown RBP15.87■□□□□ 0.13
LIMS1-202ENST00000338045 TMEM248Q9NWD8 314 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 CLUHO75153 1309 aa15.87■□□□□ 0.13
LIMS1-202ENST00000338045 CCNCP24863 283 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 CDK16Q00536 496 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 KRT71Q3SY84 523 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 C5orf22Q49AR2 442 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 RAP1GAP2Q684P5 730 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 CCDC149Q6ZUS6 474 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 ZBED8Q8IZ13 594 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 DEPDC1BQ8WUY9 529 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 AZIN2Q96A70 460 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 PLD4Q96BZ4 506 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 ATP6V1G3Q96LB4 118 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 SERPINB12Q96P63 405 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 SLC39A8Q9C0K1 460 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 NACA2Q9H009 215 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 RNF38Q9H0F5 515 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 NOL6Q9H6R4 1146 aaKnown RBP15.86■□□□□ 0.13
LIMS1-202ENST00000338045 EIF2B3Q9NR50 452 aaKnown RBP15.86■□□□□ 0.13
LIMS1-202ENST00000338045 VPS18Q9P253 973 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 ZNF212Q9UDV6 495 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 TRHDEQ9UKU6 1024 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 DOCK4Q8N1I0 1966 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 ANAPC1Q9H1A4 1944 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 C2orf78A6NCI8 922 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 GOLGA6CA6NDK9 693 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 C2orf71A6NGG8 1288 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 HMGB1P1B2RPK0 211 aaPredicted RBP15.86■□□□□ 0.13
LIMS1-202ENST00000338045 TCEA3O75764 348 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 SPATA31D3P0C874 917 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 GOLGA6DP0CG33 693 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 DNAJB1P25685 340 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 CA8P35219 290 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 MAGEA3P43357 314 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 IRAK1P51617 712 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 NDST2P52849 883 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 PABPC1LQ4VXU2 614 aaKnown RBP15.86■□□□□ 0.13
LIMS1-202ENST00000338045 TEX44Q53QW1 395 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 ALFQ53S48 1182 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 AGBL2Q5U5Z8 902 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 SPATA31D4Q6ZUB0 917 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 UHMK1Q8TAS1 419 aaKnown RBP15.86■□□□□ 0.13
LIMS1-202ENST00000338045 POF1BQ8WVV4 589 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 IGSF8Q969P0 613 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 KLF16Q9BXK1 252 aaPredicted RBP15.86■□□□□ 0.13
LIMS1-202ENST00000338045 ENTPD7Q9NQZ7 604 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 GOLGA6AQ9NYA3 693 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 SEPT10Q9P0V9 454 aa15.86■□□□□ 0.13
LIMS1-202ENST00000338045 HIDE1A8MVS5 230 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 ACSL4O60488 711 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 MAFKO60675 156 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 BANF1O75531 89 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 STC2O76061 302 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 OLFM2O95897 454 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 TACR2P21452 398 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms