RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 EZH1Q92800 747 aaPredicted RBP13.27□□□□□ -0.29
APTX-201ENST00000309615 EPHX3Q9H6B9 360 aa13.27□□□□□ -0.29
APTX-201ENST00000309615 PCDH18Q9HCL0 1135 aa13.27□□□□□ -0.29
APTX-201ENST00000309615 ABCB8Q9NUT2 735 aa13.27□□□□□ -0.29
APTX-201ENST00000309615 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.26□□□□□ -0.29
APTX-201ENST00000309615 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.26□□□□□ -0.29
APTX-201ENST00000309615 PSTPIP1O43586 416 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 KAT7O95251 611 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 TARSP26639 723 aaKnown RBP13.26□□□□□ -0.29
APTX-201ENST00000309615 CD70P32970 193 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 NUMBP49757 651 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 GRSF1Q12849 480 aaKnown RBP eCLIP13.26□□□□□ -0.29
APTX-201ENST00000309615 LMAN2Q12907 356 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 MMRN1Q13201 1228 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 ZNF177Q13360 481 aaPredicted RBP13.26□□□□□ -0.29
APTX-201ENST00000309615 CXorf57Q6NSI4 855 aaKnown RBP13.26□□□□□ -0.29
APTX-201ENST00000309615 C1orf228Q6PIY5 440 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 RFX8Q6ZV50 586 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 PEX26Q7Z412 305 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 SYCE1Q8N0S2 351 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 ZNF687Q8N1G0 1237 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 TERB1Q8NA31 727 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 FAM71BQ8TC56 605 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 TSC1Q92574 1164 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 LMLNQ96KR4 655 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 CALN1Q9BXU9 219 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 LTB4R2Q9NPC1 389 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 NDFIP2Q9NV92 336 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 TBC1D30Q9Y2I9 924 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 SLC27A6Q9Y2P4 619 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 F5P12259 2224 aa13.26□□□□□ -0.29
APTX-201ENST00000309615 LRRD1A4D1F6 860 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 ANTXRLA6NF34 631 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 TMEM221A6NGB7 291 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 H3BRJ5 948 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 M0R296 226 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 STK25O00506 426 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 EGFP01133 1207 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 RHOQP17081 205 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 IL4RP24394 825 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 OR1E1P30953 314 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 HTR7P34969 479 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 ARL4AP40617 200 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 GRIA2P42262 883 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 HCAR3P49019 387 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 DPYSQ14117 519 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 DPYSL3Q14195 570 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 UBXN2BQ14CS0 331 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 GEN1Q17RS7 908 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 CCDC117Q8IWD4 279 aaPredicted RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 CSPG4P5Q96PW8 444 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 MFSD1Q9H3U5 465 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 TMEM248Q9NWD8 314 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 DNAI1Q9UI46 699 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 GGA2Q9UJY4 613 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 AMFRQ9UKV5 643 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 PACSIN2Q9UNF0 486 aaPredicted RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 MRPS17Q9Y2R5 130 aaKnown RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 KIAA1549LQ6ZVL6 1849 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 A0A0A0MRY4 1105 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 TBC1D3BA6NDS4 549 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 C3orf70A6NLC5 250 aaPredicted RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 FAM170BA6NMN3 283 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 PRRT4C9JH25 899 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 K7EQS6 105 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 DAPK3O43293 454 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 KRT1P04264 644 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 APODP05090 189 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 KDELR1P24390 212 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 CTNNA1P35221 906 aaKnown RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 ZNF135P52742 658 aaPredicted RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 CCINQ13939 588 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 PDK2Q15119 407 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 TMEM215Q68D42 235 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 ANKS1BQ7Z6G8 1248 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 SUGP1Q8IWZ8 645 aaKnown RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.25□□□□□ -0.29
APTX-201ENST00000309615 RTL3Q8N8U3 475 aaKnown RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 ZNF557Q8N988 423 aaPredicted RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 FLCNQ8NFG4 579 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 EXOC4Q96A65 974 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 CATSPERBQ9H7T0 1116 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 RBM12Q9NTZ6 932 aaKnown RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 DDX56Q9NY93 547 aaKnown RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 KIAA1522Q9P206 1035 aaPredicted RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 INTS6Q9UL03 887 aaKnown RBP13.25□□□□□ -0.29
APTX-201ENST00000309615 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.25□□□□□ -0.29
APTX-201ENST00000309615 TECTAO75443 2155 aa13.25□□□□□ -0.29
APTX-201ENST00000309615 FGF10O15520 208 aaPredicted RBP13.24□□□□□ -0.29
APTX-201ENST00000309615 PABPC1P11940 636 aaKnown RBP13.24□□□□□ -0.29
APTX-201ENST00000309615 ERCC2P18074 760 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 DRD1P21728 446 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 AMPD1P23109 780 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 MZF1P28698 734 aaPredicted RBP13.24□□□□□ -0.29
APTX-201ENST00000309615 CSKP41240 450 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 FZD5Q13467 585 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 PREPLQ4J6C6 727 aaPredicted RBP13.24□□□□□ -0.29
APTX-201ENST00000309615 KIAA0907Q7Z7F0 614 aaPredicted RBP13.24□□□□□ -0.29
APTX-201ENST00000309615 SETD3Q86TU7 594 aaPredicted RBP13.24□□□□□ -0.29
APTX-201ENST00000309615 ADIPOR2Q86V24 386 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms