RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 VPS51Q9UID3 782 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 ARHGAP31Q2M1Z3 1444 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 G3V2T6 193 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 CYP2A7P20853 494 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 MRPS22P82650 360 aaKnown RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 ACAP2Q15057 778 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 RPL10AP62906 217 aaKnown RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 FEZF2Q8TBJ5 459 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 CDH9Q9ULB4 789 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 LOC102724428A0A0B4J2F2 783 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 PGRMC2O15173 223 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 TP73O15350 636 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 BBOX1O75936 387 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 FARP2O94887 1054 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 SIK1P57059 783 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 ACTRT2Q8TDY3 377 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 RHBGQ9H310 441 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 PHKG2P15735 406 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 SLC34A1Q06495 639 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 PTGES3Q15185 160 aaKnown RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 ZIK1Q3SY52 487 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 FMR1NBQ8N0W7 255 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 SYTL5Q8TDW5 730 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 FICDQ9BVA6 458 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 UBP1Q9NZI7 540 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 GNPTGQ9UJJ9 305 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 FBXO10Q9UK96 956 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 FSHRP23945 695 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 ING5Q8WYH8 240 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 LENG1Q96BZ8 264 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-201ENST00000306085 BARHL2Q9NY43 387 aa13.64□□□□□ -0.23
TRIM56-201ENST00000306085 TDP2O95551 362 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 OR5T3Q8NGG3 340 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 TMEM47Q9BQJ4 181 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 TXNP10599 105 aaKnown RBP13.63□□□□□ -0.23
TRIM56-201ENST00000306085 ALDH7A1P49419 539 aaKnown RBP13.63□□□□□ -0.23
TRIM56-201ENST00000306085 SPIDRQ14159 915 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 SLC15A2Q16348 729 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 STRIP1Q5VSL9 837 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 REXO5Q96IC2 774 aaKnown RBP13.63□□□□□ -0.23
TRIM56-201ENST00000306085 TOR3AQ9H497 397 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 ZBTB46Q86UZ6 589 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 MIB1Q86YT6 1006 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 ZC3H7AQ8IWR0 971 aaKnown RBP13.63□□□□□ -0.23
TRIM56-201ENST00000306085 DCP1BQ8IZD4 617 aaKnown RBP13.63□□□□□ -0.23
TRIM56-201ENST00000306085 FRMD8Q9BZ67 464 aaPredicted RBP13.63□□□□□ -0.23
TRIM56-201ENST00000306085 WHRNQ9P202 907 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 MORF4L1Q9UBU8 362 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 SERPINA1P01009 418 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 CPA3P15088 417 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 ITGA9Q13797 1035 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 ATG9AQ7Z3C6 839 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 MTIF3Q9H2K0 278 aaKnown RBP13.63□□□□□ -0.23
TRIM56-201ENST00000306085 KDM4BO94953 1096 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 MSL3P1P0C860 447 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 MBL2P11226 248 aaPredicted RBP13.63□□□□□ -0.23
TRIM56-201ENST00000306085 USP46P62068 366 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 PKN1Q16512 942 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 CYP4X1Q8N118 509 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 EMC1Q8N766 993 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 TSPAN1O60635 241 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 CYP4B1P13584 511 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 IER5Q5VY09 327 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 FAM131AQ6UXB0 335 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 OFCC1Q8IZS5 231 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 FAM81AQ8TBF8 368 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 STK36Q9NRP7 1315 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.63□□□□□ -0.23
TRIM56-201ENST00000306085 ATG4AQ8WYN0 398 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 KIAA1257Q9ULG3 409 aa13.63□□□□□ -0.23
TRIM56-201ENST00000306085 FOXN1O15353 648 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ETS1P14921 441 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 CCNCP24863 283 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 SKP1P63208 163 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 PPP1R13LQ8WUF5 828 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 TNFAIP8L1Q8WVP5 186 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 C2CD2Q9Y426 696 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 GLB1LQ6UWU2 654 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 FBXO30Q8TB52 745 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 BTBD10Q9BSF8 475 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 MED28Q9H204 178 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 PEG3Q9GZU2 1588 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ZW10O43264 779 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ATF7IP2Q5U623 682 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 LSM14AQ8ND56 463 aaKnown RBP13.62□□□□□ -0.23
TRIM56-201ENST00000306085 SETD6Q8TBK2 473 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 TMEM106CQ9BVX2 250 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 STAP2Q9UGK3 403 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 EPORP19235 508 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 POU6F1Q14863 301 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ARHGAP36Q6ZRI8 547 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 AKAP7Q9P0M2 348 aaPredicted RBP13.62□□□□□ -0.23
TRIM56-201ENST00000306085 PDXKO00764 312 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 C9P02748 559 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ACOX1Q15067 660 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 TTC27Q6P3X3 843 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 DGLUCYQ7Z3D6 616 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 SLC44A5Q8NCS7 719 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms