RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 COL26A1Q96A83 441 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 MCUBQ9NWR8 336 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 CPDO75976 1380 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 ZBTB22O15209 634 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 SLC25A12O75746 678 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 RAG1P15918 1043 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 SLC1A6P48664 564 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 BCAT1P54687 386 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 ADARP55265 1226 aaKnown RBP10.58□□□□□ -0.72
CLIP1-201ENST00000302528 POU6F1Q14863 301 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 TSHZ1Q6ZSZ6 1077 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 ITIH5Q86UX2 942 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 HIPK1Q86Z02 1210 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 CAMK1DQ8IU85 385 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 DAW1Q8N136 415 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 CASKIN2Q8WXE0 1202 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 GAL3ST3Q96A11 431 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 CLIP3Q96DZ5 547 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 QRFPRQ96P65 431 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 MXRA8Q9BRK3 442 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 C1orf50Q9BV19 199 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 SOHLH2Q9NX45 425 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 KIAA1257Q9ULG3 409 aa10.58□□□□□ -0.72
CLIP1-201ENST00000302528 NDUFB10O96000 172 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 TLX1P31314 330 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 TCF7P36402 384 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 BTN3A2P78410 334 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 VPS72Q15906 364 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 MARC1Q5VT66 337 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 FAM131BQ86XD5 332 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 ELOA2Q8IYF1 753 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 TPCN2Q8NHX9 752 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 EVA1BQ9NVM1 165 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 WHRNQ9P202 907 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 DSEQ9UL01 958 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 IRAK3Q9Y616 596 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 A0A087WXM4 84 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 CCL15-CCL14A0A0B4J2E2 113 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 HAT1O14929 419 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 TSPAN3O60637 253 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 NPR3P17342 541 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 TKTP29401 623 aaKnown RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 PDHA2P29803 388 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 CCL15Q16663 113 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 COLGALT1Q8NBJ5 622 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 MYCBPAPQ8TBZ2 947 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 SEMA4DQ92854 862 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 NMRAL1Q9HBL8 299 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 RBM22Q9NW64 420 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 MAGEB16A2A368 324 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 ANKDD1BA6NHY2 528 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 PSMD11O00231 422 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 TIPRLO75663 272 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 CRATP43155 626 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 KLK7P49862 253 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 ACLYP53396 1101 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 STXBP1P61764 594 aaKnown RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 RGS1Q08116 209 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 ACSM2AQ08AH3 577 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 BST2Q10589 180 aaKnown RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 ACSM2BQ68CK6 577 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 MARK2Q7KZI7 788 aaKnown RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 SAPCD2Q86UD0 394 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 CD302Q8IX05 232 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 C8orf59Q8N0T1 100 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 FNIP1Q8TF40 1166 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 MARK1Q9P0L2 795 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 FBXL21Q9UKT6 434 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 CDH9Q9ULB4 789 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 SNX4O95219 450 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 CTSEP14091 401 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 MYL9P24844 172 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 ADSLP30566 484 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 MYBPC2Q14324 1141 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 ZMYND11Q15326 602 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 PAGE2BQ5JRK9 111 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 ZNF280DQ6N043 979 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 RASSF6Q6ZTQ3 369 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 CXXC5Q7LFL8 322 aaKnown RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 TMC7Q7Z402 723 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 MAGEE2Q8TD90 523 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 EPB41L1Q9H4G0 881 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 TAS2R13Q9NYV9 303 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 STOML2Q9UJZ1 356 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 OGTO15294 1046 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 LCA5LO95447 670 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 DNAJB2P25686 324 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 CCR1P32246 355 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 FCGRTP55899 365 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 C5orf22Q49AR2 442 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 CBWD6Q4V339 395 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 SEZ6Q53EL9 994 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 NAIF1Q69YI7 327 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 TMPRSS6Q8IU80 811 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 REXO5Q96IC2 774 aaKnown RBP10.57□□□□□ -0.72
CLIP1-201ENST00000302528 GRIP2Q9C0E4 1043 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 ANKEF1Q9NU02 776 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 CLN6Q9NWW5 311 aa10.57□□□□□ -0.72
CLIP1-201ENST00000302528 MTMR4Q9NYA4 1195 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms