RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ATP5HO75947 161 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 ADRA1BP35368 520 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 GPX6P59796 221 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 DYNLT1P63172 113 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 HTRA4P83105 476 aaPredicted RBP17.28■□□□□ 0.36
CPSF4-201ENST00000292476 NOMO1Q15155 1222 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 RAB6CQ53S08 254 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 BRMS1LQ5PSV4 323 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 SLC9A4Q6AI14 798 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 CGB2Q6NT52 195 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 RNF19BQ6ZMZ0 732 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 FIBCD1Q8N539 461 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 ZNF461Q8TAF7 563 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 CDX2Q99626 313 aaPredicted RBP17.28■□□□□ 0.36
CPSF4-201ENST00000292476 SEPT5Q99719 369 aaPredicted RBP17.28■□□□□ 0.36
CPSF4-201ENST00000292476 RAB6CQ9H0N0 254 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 OLA1Q9NTK5 396 aaKnown RBP17.28■□□□□ 0.36
CPSF4-201ENST00000292476 CLIC5Q9NZA1 410 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 PATJQ8NI35 1801 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 CHD7Q9P2D1 2997 aa17.28■□□□□ 0.36
CPSF4-201ENST00000292476 CFAP69A5D8W1 941 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 TM9SF1O15321 606 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 NQO1P15559 274 aaKnown RBP17.27■□□□□ 0.36
CPSF4-201ENST00000292476 OR1D2P34982 312 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 CXCR3P49682 368 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 ROR1Q01973 937 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 IFRD2Q12894 506 aaPredicted RBP17.27■□□□□ 0.36
CPSF4-201ENST00000292476 FAM133BQ5BKY9 247 aaKnown RBP17.27■□□□□ 0.36
CPSF4-201ENST00000292476 PRSS55Q6UWB4 352 aaPredicted RBP17.27■□□□□ 0.36
CPSF4-201ENST00000292476 CCDC185Q8N715 623 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 MYLIPQ8WY64 445 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 EDEM1Q92611 657 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 RNF34Q969K3 372 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 RTP4Q96DX8 246 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 CDK5RAP1Q96SZ6 601 aaKnown RBP17.27■□□□□ 0.36
CPSF4-201ENST00000292476 SMOC2Q9H3U7 446 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 PRDM12Q9H4Q4 367 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 ECT2Q9H8V3 914 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 MLXIPLQ9NP71 852 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 TLR8Q9NR97 1041 aaKnown RBP17.27■□□□□ 0.36
CPSF4-201ENST00000292476 PIGVQ9NUD9 493 aa17.27■□□□□ 0.36
CPSF4-201ENST00000292476 SYNJ2BP-COX16A0A087WUM0 186 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 LINC01553A4QN01 128 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 FOXO6A8MYZ6 492 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 CHADO15335 359 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 SLC2A3P11169 496 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 CCNB1P14635 433 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 IL4RP24394 825 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 GBP2P32456 591 aaPredicted RBP17.26■□□□□ 0.35
CPSF4-201ENST00000292476 HCAR3P49019 387 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 ATXN1P54253 815 aaKnown RBP17.26■□□□□ 0.35
CPSF4-201ENST00000292476 GDF10P55107 478 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 DUSP4Q13115 394 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 MTA1Q13330 715 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 ZKSCAN8Q15776 578 aaPredicted RBP17.26■□□□□ 0.35
CPSF4-201ENST00000292476 OTUD1Q5VV17 481 aaPredicted RBP17.26■□□□□ 0.35
CPSF4-201ENST00000292476 C4orf22Q6V702 233 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 PDZD4Q76G19 769 aaPredicted RBP17.26■□□□□ 0.35
CPSF4-201ENST00000292476 ZNF398Q8TD17 642 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 FBF1Q8TES7 1133 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 SERPINB11Q96P15 392 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 ADAM33Q9BZ11 813 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 WDR6Q9NNW5 1121 aaKnown RBP17.26■□□□□ 0.35
CPSF4-201ENST00000292476 MRPL17Q9NRX2 175 aaKnown RBP17.26■□□□□ 0.35
CPSF4-201ENST00000292476 GPATCH2LQ9NWQ4 482 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 COX16Q9P0S2 106 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 USH1CQ9Y6N9 552 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 WDR27A2RRH5 827 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 EDF1O60869 148 aaKnown RBP17.26■□□□□ 0.35
CPSF4-201ENST00000292476 SLC34A2O95436 690 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 ATP6V1G2O95670 118 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 RBP3P10745 1247 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 CA4P22748 312 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 HTR7P34969 479 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 MMRN1Q13201 1228 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 CA9Q16790 459 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 PREPLQ4J6C6 727 aaPredicted RBP17.26■□□□□ 0.35
CPSF4-201ENST00000292476 ACBD5Q5T8D3 534 aaPredicted RBP17.26■□□□□ 0.35
CPSF4-201ENST00000292476 WLSQ5T9L3 541 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 ANKRD22Q5VYY1 191 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 RSPO2Q6UXX9 243 aaPredicted RBP17.26■□□□□ 0.35
CPSF4-201ENST00000292476 UNC45BQ8IWX7 931 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 PLD5Q8N7P1 536 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 PDZD8Q8NEN9 1154 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 PCDH19Q8TAB3 1148 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 LRRC8CQ8TDW0 803 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 DQX1Q8TE96 717 aaKnown RBP17.26■□□□□ 0.35
CPSF4-201ENST00000292476 ARNTL2Q8WYA1 636 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 OVCA2Q8WZ82 227 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 FBXO32Q969P5 355 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 CSPG4P5Q96PW8 444 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 TXLNGQ9NUQ3 528 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 FNIP2Q9P278 1114 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 COL4A6Q14031 1691 aa17.26■□□□□ 0.35
CPSF4-201ENST00000292476 RFXAPO00287 272 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 DCTN3O75935 186 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 FAM155BO75949 473 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 ABLIM3O94929 683 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 IGLV3-25P01717 112 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 ALADP13716 330 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms