RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TCAF2A6NFQ2 919 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 EPHB6O15197 1021 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 PAGE1O75459 146 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 KCNK5O95279 499 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 F9P00740 461 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 SRPRAP08240 638 aaKnown RBP16.59■□□□□ 0.25
USE1-201ENST00000263897 ADRB1P08588 477 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 ZNF18P17022 549 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 TFE3P19532 575 aaPredicted RBP16.59■□□□□ 0.25
USE1-201ENST00000263897 MAOBP27338 520 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 SOX5P35711 763 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 CTSOP43234 321 aaPredicted RBP16.59■□□□□ 0.25
USE1-201ENST00000263897 PLK1P53350 603 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 JAM2P57087 298 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 RPS14P62263 151 aaKnown RBP16.59■□□□□ 0.25
USE1-201ENST00000263897 NOMO3P69849 1222 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 ECT2LQ008S8 904 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 NCAPHQ15003 741 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 SYCP1Q15431 976 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 HNRNPA1L2Q32P51 320 aaKnown RBP16.59■□□□□ 0.25
USE1-201ENST00000263897 C2CD6Q53TS8 623 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 OTUD1Q5VV17 481 aaPredicted RBP16.59■□□□□ 0.25
USE1-201ENST00000263897 FAM124AQ86V42 546 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 CACUL1Q86Y37 369 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 MSANTD4Q8NCY6 345 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 IGSF8Q969P0 613 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 PGAP3Q96FM1 320 aaPredicted RBP16.59■□□□□ 0.25
USE1-201ENST00000263897 RPRD1AQ96P16 312 aaPredicted RBP16.59■□□□□ 0.25
USE1-201ENST00000263897 WDCPQ9H6R7 721 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 PIGVQ9NUD9 493 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 TMEM51Q9NW97 253 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 SLCO3A1Q9UIG8 710 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 STAP1Q9ULZ2 295 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 HS3ST4Q9Y661 456 aa16.59■□□□□ 0.25
USE1-201ENST00000263897 FAM170AA1A519 330 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 LGALS16A8MUM7 142 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 ADCY5O95622 1261 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 DNTTP04053 509 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 CHRNB2P17787 502 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 STAT1P42224 750 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 OXCT1P55809 520 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 CDR2Q01850 454 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 SLC25A52Q3SY17 297 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 C5orf22Q49AR2 442 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 BRMS1LQ5PSV4 323 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 FAM102AQ5T9C2 384 aaPredicted RBP16.58■□□□□ 0.24
USE1-201ENST00000263897 NAA35Q5VZE5 725 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 SND1Q7KZF4 910 aaKnown RBP eCLIP16.58■□□□□ 0.24
USE1-201ENST00000263897 C14orf80Q86SX3 495 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 CIR1Q86X95 450 aaPredicted RBP16.58■□□□□ 0.24
USE1-201ENST00000263897 SLC20A1Q8WUM9 679 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 SPAG5Q96R06 1193 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 SIK2Q9H0K1 926 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 PCED1AQ9H1Q7 454 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 RSPH9Q9H1X1 276 aaPredicted RBP16.58■□□□□ 0.24
USE1-201ENST00000263897 HSD3B7Q9H2F3 369 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 ARHGEF38Q9NXL2 777 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 TMEM63CQ9P1W3 806 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 SUSD2Q9UGT4 822 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 TMEM59LQ9UK28 342 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 VANGL2Q9ULK5 521 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 LAMA1P25391 3075 aa16.58■□□□□ 0.24
USE1-201ENST00000263897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.57■□□□□ 0.24
USE1-201ENST00000263897 TARSL2A2RTX5 802 aaKnown RBP16.57■□□□□ 0.24
USE1-201ENST00000263897 MEI4A8MW99 385 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 TTC34A8MYJ7 566 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 GOLGA8SH3BPF8 625 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 ARHGAP33O14559 1287 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 SIN3BO75182 1162 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 CYP1A1P04798 512 aaPredicted RBP16.57■□□□□ 0.24
USE1-201ENST00000263897 GNSP15586 552 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 PDGFRAP16234 1089 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 KCNA4P22459 653 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 MZF1P28698 734 aaPredicted RBP16.57■□□□□ 0.24
USE1-201ENST00000263897 ACSL1P33121 698 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 FLT3P36888 993 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 MAPK8P45983 427 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 SULT1E1P49888 294 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 FMO1Q01740 532 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 CENPCQ03188 943 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 UBXN1Q04323 297 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 DEUP1Q05D60 604 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 TYRO3Q06418 890 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 ZNF177Q13360 481 aaPredicted RBP16.57■□□□□ 0.24
USE1-201ENST00000263897 UAP1L1Q3KQV9 507 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 C9orf64Q5T6V5 341 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 N4BP2L1Q5TBK1 243 aaPredicted RBP16.57■□□□□ 0.24
USE1-201ENST00000263897 DCAF12L1Q5VU92 463 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 ZNF776Q68DI1 518 aaPredicted RBP16.57■□□□□ 0.24
USE1-201ENST00000263897 CXorf57Q6NSI4 855 aaKnown RBP16.57■□□□□ 0.24
USE1-201ENST00000263897 ARCQ7LC44 396 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 APTXQ7Z2E3 356 aaKnown RBP16.57■□□□□ 0.24
USE1-201ENST00000263897 DHX40Q8IX18 779 aaKnown RBP16.57■□□□□ 0.24
USE1-201ENST00000263897 NEK11Q8NG66 645 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 ALG14Q96F25 216 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 RPL10LQ96L21 214 aaKnown RBP16.57■□□□□ 0.24
USE1-201ENST00000263897 PCMTD1Q96MG8 357 aaPredicted RBP16.57■□□□□ 0.24
USE1-201ENST00000263897 ERGIC2Q96RQ1 377 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 PPP1R9BQ96SB3 815 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 TBCBQ99426 244 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms