RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 RABEP2Q9H5N1 569 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 VPS37BQ9H9H4 285 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 EPB41L5Q9HCM4 733 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 F5P12259 2224 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 SMIM23A6NLE4 172 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 ANXA9O76027 345 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 S100BP04271 92 aaPredicted RBP5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 ATP1A1P05023 1023 aaKnown RBP5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 H2AFXP16104 143 aaPredicted RBP5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 HSPA9P38646 679 aaKnown RBP5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 DMC1Q14565 340 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 TMED2Q15363 201 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 UAP1Q16222 522 aaPredicted RBP5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 P3H1Q32P28 736 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 C2CD6Q53TS8 623 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 FIGNQ5HY92 759 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 FAM183BPQ6ZVS7 135 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 CCDC91Q7Z6B0 441 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 CTAGE3PQ8IX95 158 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 RNF10Q8N5U6 811 aaKnown RBP5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 CCDC63Q8NA47 563 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 GRIN3AQ8TCU5 1115 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 KCTD13Q8WZ19 329 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 CCT6BQ92526 530 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 SEMA4DQ92854 862 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 PBKQ96KB5 322 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 NUSAP1Q9BXS6 441 aaKnown RBP5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 MYO5AQ9Y4I1 1855 aaKnown RBP5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 NPC1O15118 1278 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 CHADO15335 359 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 MBTPS2O43462 519 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 LILRB3O75022 631 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 CPP00450 1065 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 MAGEA9P43362 315 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 GYS2P54840 703 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 EIF3EP60228 445 aaKnown RBP5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 VSNL1P62760 191 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 SLC7A5Q01650 507 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 SNX1Q13596 522 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 SMTNL2Q2TAL5 461 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 LEXMQ3ZCV2 418 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 AASDHQ4L235 1098 aaPredicted RBP5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 WDR59Q6PJI9 974 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 CLEC20AQ6ZU45 233 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 ZC3H18Q86VM9 953 aaKnown RBP5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 LRRC49Q8IUZ0 686 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 FAM71AQ8IYT1 594 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 MCOLN2Q8IZK6 566 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 FUKQ8N0W3 1084 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 LINC01599Q8WXQ3 324 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 SH3KBP1Q96B97 665 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 FAF2Q96CS3 445 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 CYP2S1Q96SQ9 504 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 ZCCHC2Q9C0B9 1178 aaKnown RBP5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 ATP13A3Q9H7F0 1226 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 TRIM10Q9UDY6 481 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 INTUQ9ULD6 942 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 PCDHGC5Q9Y5F6 944 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 IRAK3Q9Y616 596 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 NUMBLQ9Y6R0 609 aa5.3□□□□□ -1.56
SCARNA15-201ENST00000607520 MSI1O43347 362 aaKnown RBP5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 KAT7O95251 611 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 KLF8O95600 359 aaPredicted RBP5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 TYRP14679 529 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 CEBPBP17676 345 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 ARHGAP25P42331 645 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 PSMD8P48556 350 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 GPR15P49685 360 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 NUMBP49757 651 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 PAPOLAP51003 745 aaKnown RBP5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 AIF1P55008 147 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 GEMP55040 296 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 SLC12A1Q13621 1099 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 EIF4HQ15056 248 aaKnown RBP5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 ACOX1Q15067 660 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 ARMC12Q5T9G4 340 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 PHLDB3Q6NSJ2 640 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 OR10T2Q8NGX3 314 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 PIGKQ92643 395 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 KRT35Q92764 455 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 VPS39Q96JC1 886 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 FOPNLQ96NB1 174 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 SRPK1Q96SB4 655 aaKnown RBP5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 SELENOSQ9BQE4 189 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 BTBD1Q9H0C5 482 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 CCSER2Q9H7U1 834 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 VRTNQ9H8Y1 702 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 TBC1D17Q9HA65 648 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 RAD18Q9NS91 495 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 GPATCH2LQ9NWQ4 482 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 HCFC1R1Q9NWW0 138 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 MARCH5Q9NX47 278 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 SIX4Q9UIU6 781 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 DNPEPQ9ULA0 475 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 NAALADL1Q9UQQ1 740 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 COQ4Q9Y3A0 265 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 A0A1W2PQ67 120 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 SIGLEC16A6NMB1 481 aa5.29□□□□□ -1.56
SCARNA15-201ENST00000607520 AXIN1O15169 862 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms