RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 LZTR1Q8N653 840 aa23.26■■□□□ 1.31
IRF3-228ENST00000601291 PRDM12Q9H4Q4 367 aa23.26■■□□□ 1.31
IRF3-228ENST00000601291 DMGDHQ9UI17 866 aaKnown RBP23.26■■□□□ 1.31
IRF3-228ENST00000601291 AGO1Q9UL18 857 aaKnown RBP23.26■■□□□ 1.31
IRF3-228ENST00000601291 MFHAS1Q9Y4C4 1052 aa23.26■■□□□ 1.31
IRF3-228ENST00000601291 DENND4CQ5VZ89 1909 aa23.25■■□□□ 1.31
IRF3-228ENST00000601291 GLP2RO95838 553 aa23.25■■□□□ 1.31
IRF3-228ENST00000601291 KLKB1P03952 638 aa23.25■■□□□ 1.31
IRF3-228ENST00000601291 RHOQP17081 205 aa23.25■■□□□ 1.31
IRF3-228ENST00000601291 GUCY2DQ02846 1103 aa23.25■■□□□ 1.31
IRF3-228ENST00000601291 RABGAP1LQ5R372 815 aa23.25■■□□□ 1.31
IRF3-228ENST00000601291 ADGRF1Q5T601 910 aa23.25■■□□□ 1.31
IRF3-228ENST00000601291 DARS2Q6PI48 645 aaKnown RBP23.25■■□□□ 1.31
IRF3-228ENST00000601291 RTL3Q8N8U3 475 aaKnown RBP23.25■■□□□ 1.31
IRF3-228ENST00000601291 RSAD2Q8WXG1 361 aa23.25■■□□□ 1.31
IRF3-228ENST00000601291 TMEM121Q9BTD3 319 aa23.25■■□□□ 1.31
IRF3-228ENST00000601291 COLQQ9Y215 455 aaPredicted RBP23.25■■□□□ 1.31
IRF3-228ENST00000601291 ZNF510Q9Y2H8 683 aa23.25■■□□□ 1.31
IRF3-228ENST00000601291 GOLGA6L7A0A1B0GV03 622 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 CFAP69A5D8W1 941 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 DRGXA6NNA5 263 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 WASH4PA8MWX3 477 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 SGK1O00141 431 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 PPP1R12AO14974 1030 aaPredicted RBP23.24■■□□□ 1.31
IRF3-228ENST00000601291 NCAM2O15394 837 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 SLC10A2Q12908 348 aaPredicted RBP23.24■■□□□ 1.31
IRF3-228ENST00000601291 PDK1Q15118 436 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 FAM133BQ5BKY9 247 aaKnown RBP23.24■■□□□ 1.31
IRF3-228ENST00000601291 ANKRD54Q6NXT1 300 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 IFT20Q8IY31 132 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 LGI2Q8N0V4 545 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 ALLCQ8N6M5 410 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 ADAMTS19Q8TE59 1207 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 OLFM3Q96PB7 478 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 TRIM51Q9BSJ1 452 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 PARD6BQ9BYG5 372 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 MPP6Q9NZW5 540 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 CFAP97Q9P2B7 532 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 STOML2Q9UJZ1 356 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 MYO7AQ13402 2215 aa23.24■■□□□ 1.31
IRF3-228ENST00000601291 HACD1B0YJ81 288 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 MAP3K6O95382 1288 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 CEBPBP17676 345 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 GPR149Q86SP6 731 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 TTC16Q8NEE8 873 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 CCHCR1Q8TD31 782 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 PNKPQ96T60 521 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 ERP44Q9BS26 406 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 BCLAF3A2AJT9 711 aaKnown RBP23.23■■□□□ 1.31
IRF3-228ENST00000601291 LEFTY2O00292 366 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 LINC01565O15544 149 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 ZNF189O75820 626 aaPredicted RBP23.23■■□□□ 1.31
IRF3-228ENST00000601291 HOXB8P17481 243 aaPredicted RBP23.23■■□□□ 1.31
IRF3-228ENST00000601291 MX2P20592 715 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 SLC6A4P31645 630 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 STIP1P31948 543 aaKnown RBP23.23■■□□□ 1.31
IRF3-228ENST00000601291 ZXDBP98169 803 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 PTK6Q13882 451 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 SLC45A4Q5BKX6 768 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 ARTNQ5T4W7 220 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 WDR93Q6P2C0 686 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 Q6ZNB5 142 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 HTR3DQ70Z44 454 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 NPWQ8N729 165 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 CCDC89Q8N998 374 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 TFB1MQ8WVM0 346 aaKnown RBP23.23■■□□□ 1.31
IRF3-228ENST00000601291 ING5Q8WYH8 240 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 IGSF8Q969P0 613 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 WBP2Q969T9 261 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 QKIQ96PU8 341 aaKnown RBP eCLIP23.23■■□□□ 1.31
IRF3-228ENST00000601291 FERMT1Q9BQL6 677 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 TTYH1Q9H313 450 aaPredicted RBP23.23■■□□□ 1.31
IRF3-228ENST00000601291 RETREG1Q9H6L5 497 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 EPB41L5Q9HCM4 733 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 TMEM248Q9NWD8 314 aa23.23■■□□□ 1.31
IRF3-228ENST00000601291 ADAM15Q13444 863 aa23.22■■□□□ 1.31
IRF3-228ENST00000601291 C5orf22Q49AR2 442 aa23.22■■□□□ 1.31
IRF3-228ENST00000601291 TTC39BQ5VTQ0 682 aaPredicted RBP23.22■■□□□ 1.31
IRF3-228ENST00000601291 RFWD3Q6PCD5 774 aa23.22■■□□□ 1.31
IRF3-228ENST00000601291 NLRP14Q86W24 1093 aa23.22■■□□□ 1.31
IRF3-228ENST00000601291 SH3RF2Q8TEC5 729 aa23.22■■□□□ 1.31
IRF3-228ENST00000601291 BRD8Q9H0E9 1235 aa23.22■■□□□ 1.31
IRF3-228ENST00000601291 TDP1Q9NUW8 608 aa23.22■■□□□ 1.31
IRF3-228ENST00000601291 GREM1O60565 184 aa23.21■■□□□ 1.31
IRF3-228ENST00000601291 KRT14P02533 472 aa23.21■■□□□ 1.31
IRF3-228ENST00000601291 FSHRP23945 695 aa23.21■■□□□ 1.31
IRF3-228ENST00000601291 ITFG1Q8TB96 612 aa23.21■■□□□ 1.31
IRF3-228ENST00000601291 APOL5Q9BWW9 433 aa23.21■■□□□ 1.31
IRF3-228ENST00000601291 SMG9Q9H0W8 520 aaKnown RBP23.21■■□□□ 1.31
IRF3-228ENST00000601291 GDF3Q9NR23 364 aa23.21■■□□□ 1.31
IRF3-228ENST00000601291 ASIC3Q9UHC3 531 aa23.21■■□□□ 1.31
IRF3-228ENST00000601291 PDE4DIPQ5VU43 2346 aa23.21■■□□□ 1.31
IRF3-228ENST00000601291 E2F8A0AVK6 867 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 TYW5A2RUC4 315 aaKnown RBP23.2■■□□□ 1.3
IRF3-228ENST00000601291 ZSCAN5CA6NGD5 496 aaPredicted RBP23.2■■□□□ 1.3
IRF3-228ENST00000601291 DYNC1I1O14576 645 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 IFNB1P01574 187 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 MAPKAPK2P49137 400 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 GALNT2Q10471 571 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 GRIN2CQ14957 1233 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms