RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	MKRN2	Q9H000	416 aa	Known RBP	16.01	■□□□□ 0.15
PLD3-223	ENST00000600948	SMOC1	Q9H4F8	434 aa		16.01	■□□□□ 0.15
PLD3-223	ENST00000600948	CD93	Q9NPY3	652 aa		16.01	■□□□□ 0.15
PLD3-223	ENST00000600948	VPS45	Q9NRW7	570 aa		16.01	■□□□□ 0.15
PLD3-223	ENST00000600948	TMEM59L	Q9UK28	342 aa		16.01	■□□□□ 0.15
PLD3-223	ENST00000600948	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	MAP3K13	O43283	966 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	SYNCRIP	O60506	623 aa	Known RBP	16	■□□□□ 0.15
PLD3-223	ENST00000600948	ZNF217	O75362	1048 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	ATP5B	P06576	529 aa	Known RBP	16	■□□□□ 0.15
PLD3-223	ENST00000600948	UNG	P13051	313 aa	Predicted RBP	16	■□□□□ 0.15
PLD3-223	ENST00000600948	POLR2E	P19388	210 aa	Known RBP	16	■□□□□ 0.15
PLD3-223	ENST00000600948	DHPS	P49366	369 aa	Predicted RBP	16	■□□□□ 0.15
PLD3-223	ENST00000600948	CXCR3	P49682	368 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	COPA	P53621	1224 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	MTA1	Q13330	715 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	CAMK2G	Q13555	558 aa	Predicted RBP	16	■□□□□ 0.15
PLD3-223	ENST00000600948	SLC25A52	Q3SY17	297 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	FNDC3B	Q53EP0	1204 aa	Known RBP	16	■□□□□ 0.15
PLD3-223	ENST00000600948	SPDYC	Q5MJ68	293 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	BRMS1L	Q5PSV4	323 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	FBXL22	Q6P050	247 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	KIAA1324	Q6UXG2	1013 aa	Known RBP	16	■□□□□ 0.15
PLD3-223	ENST00000600948	MMS22L	Q6ZRQ5	1243 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	CYP2U1	Q7Z449	544 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	METTL3	Q86U44	580 aa	Known RBP	16	■□□□□ 0.15
PLD3-223	ENST00000600948	CIR1	Q86X95	450 aa	Predicted RBP	16	■□□□□ 0.15
PLD3-223	ENST00000600948	CCDC117	Q8IWD4	279 aa	Predicted RBP	16	■□□□□ 0.15
PLD3-223	ENST00000600948	TMEFF1	Q8IYR6	380 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	ZNF366	Q8N895	744 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	TTC17	Q96AE7	1141 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	PCDHB18P	Q96TA0	734 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	TBCB	Q99426	244 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	PRDM16	Q9HAZ2	1276 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	ANLN	Q9NQW6	1124 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	CYP8B1	Q9UNU6	501 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	PLA2G4C	Q9UP65	541 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	HS3ST4	Q9Y661	456 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948	NUMA1	Q14980	2115 aa		16	■□□□□ 0.15
PLD3-223	ENST00000600948		H0Y626	953 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948		I6L893	689 aa	Predicted RBP	15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	GDF9	O60383	454 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	PAGE1	O75459	146 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	ADCY5	O95622	1261 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	CAVIN2	O95810	425 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	ASL	P04424	464 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	GGCX	P38435	758 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	CSK	P41240	450 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	PTGER3	P43115	390 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	CENPC	Q03188	943 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	DEUP1	Q05D60	604 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	PTP4A2	Q12974	167 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	AUH	Q13825	339 aa	Known RBP	15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	PUM1	Q14671	1186 aa	Known RBP eCLIP	15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	PITRM1	Q5JRX3	1037 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	RABGAP1L	Q5R372	815 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	TTC39B	Q5VTQ0	682 aa	Predicted RBP	15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	TCEAL6	Q6IPX3	200 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	SLC36A4	Q6YBV0	504 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	ARC	Q7LC44	396 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	BNIPL	Q7Z465	357 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	TMPRSS6	Q8IU80	811 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	CCAR2	Q8N163	923 aa	Known RBP	15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	SLC30A5	Q8TAD4	765 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	BAP1	Q92560	729 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	TCEAL3	Q969E4	200 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	IGSF8	Q969P0	613 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	MYO19	Q96H55	970 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	C11orf70	Q9BRQ4	267 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	METTL5	Q9NRN9	209 aa	Known RBP	15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	ARHGEF38	Q9NXL2	777 aa		15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	KIAA1522	Q9P206	1035 aa	Predicted RBP	15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	USP36	Q9P275	1121 aa	Known RBP	15.99	■□□□□ 0.15
PLD3-223	ENST00000600948	CDV3	Q9UKY7	258 aa	Known RBP	15.99	■□□□□ 0.15
PLD3-223	ENST00000600948		A0A1B0GTH6	734 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	15.98	■□□□□ 0.15
PLD3-223	ENST00000600948		A0A1B0GVM2	712 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	TCAF2	A6NFQ2	919 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	AP5Z1	O43299	807 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	F9	P00740	461 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	C7	P10643	843 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	SDHB	P21912	280 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	IRAK1	P51617	712 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	ATXN1	P54253	815 aa	Known RBP	15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	RPL6	Q02878	288 aa	Known RBP	15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	CLEC16A	Q2KHT3	1053 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	PLEKHG6	Q3KR16	790 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	C5orf22	Q49AR2	442 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	AASDH	Q4L235	1098 aa	Predicted RBP	15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	ARMCX6	Q7L4S7	300 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	C14orf80	Q86SX3	495 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	APCDD1	Q8J025	514 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	C12orf50	Q8NA57	414 aa	Predicted RBP	15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	OR2T3	Q8NH03	318 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	NETO1	Q8TDF5	533 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	SIPA1	Q96FS4	1042 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	MRGPRX3	Q96LB0	322 aa		15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	NAP1L5	Q96NT1	182 aa	Predicted RBP	15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	RPRD1A	Q96P16	312 aa	Predicted RBP	15.98	■□□□□ 0.15
PLD3-223	ENST00000600948	TKTL2	Q9H0I9	626 aa		15.98	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms