RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	DEUP1	Q05D60	604 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	ASIC2	Q16515	512 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	C15orf59	Q2T9L4	293 aa	Predicted RBP	17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	MAP7D1	Q3KQU3	841 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	BRMS1L	Q5PSV4	323 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	PPP1R15B	Q5SWA1	713 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	MBLAC2	Q68D91	279 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	ACAD10	Q6JQN1	1059 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	PRR23B	Q6ZRT6	265 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	MFN1	Q8IWA4	741 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	MCOLN2	Q8IZK6	566 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	MSANTD4	Q8NCY6	345 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	HMGB4	Q8WW32	186 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	RLN3	Q8WXF3	142 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	RUBCN	Q92622	972 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	CENPI	Q92674	756 aa	Predicted RBP	17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	ZC3H10	Q96K80	434 aa	Known RBP	17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	CIPC	Q9C0C6	399 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	TKTL2	Q9H0I9	626 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	DUSP15	Q9H1R2	295 aa	Predicted RBP	17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	TMEM245	Q9H330	911 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	CD93	Q9NPY3	652 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	MBD1	Q9UIS9	605 aa	Predicted RBP	17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	STAP1	Q9ULZ2	295 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	LAMA1	P25391	3075 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867		A0A1W2PQJ5	194 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867		F5H5T6	163 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	TIMM44	O43615	452 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	GYPC	P04921	128 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	SKIL	P12757	684 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	NDUFV2	P19404	249 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	ABCB4	P21439	1286 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	P2RY2	P41231	377 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	C1QBP	Q07021	282 aa	Known RBP	17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	PLK5	Q496M5	336 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	SFMBT2	Q5VUG0	894 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	CXorf57	Q6NSI4	855 aa	Known RBP	17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	WDR59	Q6PJI9	974 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	APCDD1	Q8J025	514 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	CCAR2	Q8N163	923 aa	Known RBP	17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	CARNMT1	Q8N4J0	409 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	C3orf20	Q8ND61	904 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	RNF34	Q969K3	372 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	TTC17	Q96AE7	1141 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	ALG14	Q96F25	216 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	MRGPRX3	Q96LB0	322 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	MAGEB5	Q9BZ81	275 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	XPO4	Q9C0E2	1151 aa	Known RBP	17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	TSPY26P	Q9H489	355 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	WDCP	Q9H6R7	721 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	POLM	Q9NP87	494 aa	Predicted RBP	17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	SEPT11	Q9NVA2	429 aa	Known RBP	17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	SLC12A6	Q9UHW9	1150 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	VANGL2	Q9ULK5	521 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	NUP205	Q92621	2012 aa		17.88	■□□□□ 0.45
MBD1-221	ENST00000589867	NUMA1	Q14980	2115 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	TNRC6B	Q9UPQ9	1833 aa	Known RBP	17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	SIGLEC16	A6NMB1	481 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	NPC1	O15118	1278 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	CNTN5	O94779	1100 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	F9	P00740	461 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	C7	P10643	843 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	HLA-E	P13747	358 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	TNFAIP3	P21580	790 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	RRM1	P23921	792 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	RDX	P35241	583 aa	Known RBP	17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	CSK	P41240	450 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	CTSO	P43234	321 aa	Predicted RBP	17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	HDAC4	P56524	1084 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	RPL7A	P62424	266 aa	Known RBP	17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	TPM4	P67936	248 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	ATP11A	P98196	1134 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	OGDH	Q02218	1023 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	ALF	Q53S48	1182 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	LAIR1	Q6GTX8	287 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	FAM131B	Q86XD5	332 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	AHI1	Q8N157	1196 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	MRGPRX1	Q96LB2	322 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	MKRN2	Q9H000	416 aa	Known RBP	17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	ZNF212	Q9UDV6	495 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	OR51B4	Q9Y5P0	310 aa		17.87	■□□□□ 0.45
MBD1-221	ENST00000589867	DNAH14	Q0VDD8	3507 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	IGLV3-10	A0A075B6K4	115 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	DRGX	A6NNA5	263 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	AP5Z1	O43299	807 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	ALDH1A2	O94788	518 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	CALB1	P05937	261 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	DLD	P09622	509 aa	Known RBP	17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	CCDC172	P0C7W6	258 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	KRT3	P12035	628 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	PDGFRA	P16234	1089 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	MZF1	P28698	734 aa	Predicted RBP	17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	PTPN9	P43378	593 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	COPA	P53621	1224 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	PITRM1	Q5JRX3	1037 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	CEP68	Q76N32	757 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	ZNF366	Q8N895	744 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	RNF214	Q8ND24	703 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	UCMA	Q8WVF2	138 aa		17.86	■□□□□ 0.45
MBD1-221	ENST00000589867	NUP58	Q9BVL2	599 aa		17.86	■□□□□ 0.45

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