RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 NUSAP1Q9BXS6 441 aaKnown RBP16.53■□□□□ 0.24
LMX1B-204ENST00000561065 VPS16Q9H269 839 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 LHX5Q9H2C1 402 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 WDFY3Q8IZQ1 3526 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 FAM170AA1A519 330 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 LUC7L3O95232 432 aaKnown RBP16.52■□□□□ 0.24
LMX1B-204ENST00000561065 APOEP02649 317 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 SERPINF2P08697 491 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 TACR2P21452 398 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 CSKP41240 450 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 DPP6P42658 865 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 NOVA1P51513 510 aaKnown RBP16.52■□□□□ 0.24
LMX1B-204ENST00000561065 IRAK1P51617 712 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 TYRO3Q06418 890 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 DRAP1Q14919 205 aaPredicted RBP16.52■□□□□ 0.24
LMX1B-204ENST00000561065 DUOXA1Q1HG43 343 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 UAP1L1Q3KQV9 507 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 FILIP1LQ4L180 1135 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 DAB2IPQ5VWQ8 1189 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 CAVIN1Q6NZI2 390 aaKnown RBP16.52■□□□□ 0.24
LMX1B-204ENST00000561065 CHSY1Q86X52 802 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 LGI2Q8N0V4 545 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 CARNMT1Q8N4J0 409 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 PRMT1Q99873 361 aaKnown RBP16.52■□□□□ 0.24
LMX1B-204ENST00000561065 DDX50Q9BQ39 737 aaKnown RBP16.52■□□□□ 0.24
LMX1B-204ENST00000561065 BPIFA3Q9BQP9 254 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 NAA15Q9BXJ9 866 aaKnown RBP16.52■□□□□ 0.24
LMX1B-204ENST00000561065 STK33Q9BYT3 514 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 SYNCQ9H7C4 482 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 FAM204AQ9H8W3 233 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 PRSS16Q9NQE7 514 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 ASNSD1Q9NWL6 643 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 TAB2Q9NYJ8 693 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 SLC6A14Q9UN76 642 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 SLCO1B1Q9Y6L6 691 aa16.52■□□□□ 0.24
LMX1B-204ENST00000561065 EPG5Q9HCE0 2579 aa16.52■□□□□ 0.23
LMX1B-204ENST00000561065 PLXNA2O75051 1894 aa16.52■□□□□ 0.23
LMX1B-204ENST00000561065 TMEM131Q92545 1883 aa16.52■□□□□ 0.23
LMX1B-204ENST00000561065 SYNJ2BP-COX16A0A087WUM0 186 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 LRRC10BA6NIK2 292 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 KCNU1A8MYU2 1149 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 HSF2BPO75031 334 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 NDUFS2O75306 463 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 DAB1O75553 588 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 CCDC172P0C7W6 258 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 UCHL3P15374 230 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 CTSOP43234 321 aaPredicted RBP16.51■□□□□ 0.23
LMX1B-204ENST00000561065 NUMBP49757 651 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 MTA1Q13330 715 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 CDH18Q13634 790 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 KRT31Q15323 416 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 KLHL40Q2TBA0 621 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 EFHC1Q5JVL4 640 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 SH3PXD2AQ5TCZ1 1133 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 FAM124AQ86V42 546 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 ZNF557Q8N988 423 aaPredicted RBP16.51■□□□□ 0.23
LMX1B-204ENST00000561065 TTC17Q96AE7 1141 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 BTN2A3PQ96KV6 586 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 DDIT4Q9NX09 232 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 COX16Q9P0S2 106 aa16.51■□□□□ 0.23
LMX1B-204ENST00000561065 LIMA1Q9UHB6 759 aaKnown RBP16.51■□□□□ 0.23
LMX1B-204ENST00000561065 GLI1P08151 1106 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 POLR2EP19388 210 aaKnown RBP16.5■□□□□ 0.23
LMX1B-204ENST00000561065 TFE3P19532 575 aaPredicted RBP16.5■□□□□ 0.23
LMX1B-204ENST00000561065 CDH5P33151 784 aaPredicted RBP16.5■□□□□ 0.23
LMX1B-204ENST00000561065 GGCXP38435 758 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 KLK7P49862 253 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 RPS14P62263 151 aaKnown RBP16.5■□□□□ 0.23
LMX1B-204ENST00000561065 CENPCQ03188 943 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 UBXN1Q04323 297 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 PITRM1Q5JRX3 1037 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 OR6B2Q6IFH4 312 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 C11orf57Q6ZUT1 292 aaPredicted RBP16.5■□□□□ 0.23
LMX1B-204ENST00000561065 SLC26A9Q7LBE3 791 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 ZDHHC17Q8IUH5 632 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 RGL4Q8IZJ4 473 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 TMEM35BQ8NCS4 154 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 DEFB124Q8NES8 71 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 NEK11Q8NG66 645 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 CEP76Q8TAP6 659 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 DNASE2BQ8WZ79 361 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 SPAG5Q96R06 1193 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 GTPBP2Q9BX10 602 aaKnown RBP16.5■□□□□ 0.23
LMX1B-204ENST00000561065 GANQ9H2C0 597 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 TMEM63CQ9P1W3 806 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 SLC12A6Q9UHW9 1150 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 PLA2G4CQ9UP65 541 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 KMT2BQ9UMN6 2715 aaPredicted RBP16.5■□□□□ 0.23
LMX1B-204ENST00000561065 CEP295Q9C0D2 2601 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 PCNX2A6NKB5 2137 aa16.5■□□□□ 0.23
LMX1B-204ENST00000561065 TYW5A2RUC4 315 aaKnown RBP16.49■□□□□ 0.23
LMX1B-204ENST00000561065 MEI4A8MW99 385 aa16.49■□□□□ 0.23
LMX1B-204ENST00000561065 I6L893 689 aaPredicted RBP16.49■□□□□ 0.23
LMX1B-204ENST00000561065 ATP5BP06576 529 aaKnown RBP16.49■□□□□ 0.23
LMX1B-204ENST00000561065 CYP11B1P15538 503 aa16.49■□□□□ 0.23
LMX1B-204ENST00000561065 ACSL1P33121 698 aa16.49■□□□□ 0.23
LMX1B-204ENST00000561065 COPB1P53618 953 aaKnown RBP16.49■□□□□ 0.23
LMX1B-204ENST00000561065 CDK17Q00537 523 aa16.49■□□□□ 0.23
LMX1B-204ENST00000561065 ZNF252P-AS1Q0IIN9 211 aa16.49■□□□□ 0.23
LMX1B-204ENST00000561065 DCAF12L1Q5VU92 463 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms