RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 DLDP09622 509 aaKnown RBP11.32□□□□□ -0.6
SPG11-216ENST00000559347 HLA-EP13747 358 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 PTGER3P43115 390 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 DHPSP49366 369 aaPredicted RBP11.32□□□□□ -0.6
SPG11-216ENST00000559347 SULT1E1P49888 294 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 ZNF165P49910 485 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 CREB5Q02930 508 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 CENPCQ03188 943 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 NME3Q13232 169 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 FNDC3BQ53EP0 1204 aaKnown RBP11.32□□□□□ -0.6
SPG11-216ENST00000559347 FSCBQ5H9T9 825 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 TTC39BQ5VTQ0 682 aaPredicted RBP11.32□□□□□ -0.6
SPG11-216ENST00000559347 TCEAL6Q6IPX3 200 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 TRNP1Q6NT89 227 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 KIAA1324Q6UXG2 1013 aaKnown RBP11.32□□□□□ -0.6
SPG11-216ENST00000559347 MMS22LQ6ZRQ5 1243 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 LPCAT2Q7L5N7 544 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 CYP2U1Q7Z449 544 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 CIR1Q86X95 450 aaPredicted RBP11.32□□□□□ -0.6
SPG11-216ENST00000559347 ZNF366Q8N895 744 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 NETO1Q8TDF5 533 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 TCEAL3Q969E4 200 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 PGAP3Q96FM1 320 aaPredicted RBP11.32□□□□□ -0.6
SPG11-216ENST00000559347 MYO19Q96H55 970 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 TBCBQ99426 244 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 METTL5Q9NRN9 209 aaKnown RBP11.32□□□□□ -0.6
SPG11-216ENST00000559347 VPS45Q9NRW7 570 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 USP36Q9P275 1121 aaKnown RBP11.32□□□□□ -0.6
SPG11-216ENST00000559347 CDV3Q9UKY7 258 aaKnown RBP11.32□□□□□ -0.6
SPG11-216ENST00000559347 INTS6Q9UL03 887 aaKnown RBP11.32□□□□□ -0.6
SPG11-216ENST00000559347 CYP8B1Q9UNU6 501 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 A0A1B0GVM2 712 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 TCAF2A6NFQ2 919 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 SMTNL1A8MU46 457 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 GOLGA8SH3BPF8 625 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 I6L893 689 aaPredicted RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 ZBTB24O43167 697 aaPredicted RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 TEX33O43247 280 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 AP5Z1O43299 807 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 GDF9O60383 454 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 SYNCRIPO60506 623 aaKnown RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 PAGE1O75459 146 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 ATP5BP06576 529 aaKnown RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 UNGP13051 313 aaPredicted RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 POLR2EP19388 210 aaKnown RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 MMP8P22894 467 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 GGCXP38435 758 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 CSKP41240 450 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 IRAK1P51617 712 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 RNASE9P60153 205 aaKnown RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 RPL6Q02878 288 aaKnown RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 MTA1Q13330 715 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 CAMK2GQ13555 558 aaPredicted RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 PUM1Q14671 1186 aaKnown RBP eCLIP11.31□□□□□ -0.6
SPG11-216ENST00000559347 IQCB1Q15051 598 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 SLC25A52Q3SY17 297 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 AASDHQ4L235 1098 aaPredicted RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 PITRM1Q5JRX3 1037 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 SPDYCQ5MJ68 293 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 BRMS1LQ5PSV4 323 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 RABGAP1LQ5R372 815 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 PEAR1Q5VY43 1037 aaPredicted RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 TRIM72Q6ZMU5 477 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 ARMCX6Q7L4S7 300 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 BNIPLQ7Z465 357 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 METTL3Q86U44 580 aaKnown RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 CACUL1Q86Y37 369 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 TMEFF1Q8IYR6 380 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 CCAR2Q8N163 923 aaKnown RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 C12orf50Q8NA57 414 aaPredicted RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 RNF34Q969K3 372 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 TTC17Q96AE7 1141 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 C11orf70Q9BRQ4 267 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 PRDM16Q9HAZ2 1276 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 ANLNQ9NQW6 1124 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 RXFP3Q9NSD7 469 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 ARHGEF38Q9NXL2 777 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 SLC12A6Q9UHW9 1150 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 TMEM59LQ9UK28 342 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 HS3ST4Q9Y661 456 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 PLXNA2O75051 1894 aa11.31□□□□□ -0.6
SPG11-216ENST00000559347 ATXN2Q99700 1313 aaKnown RBP11.31□□□□□ -0.6
SPG11-216ENST00000559347 NUMA1Q14980 2115 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 A0A1B0GTH6 734 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 H0Y626 953 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 MAP3K13O43283 966 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 ADCY5O95622 1261 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 CAVIN2O95810 425 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 ASLP04424 464 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 C7P10643 843 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 SDHBP21912 280 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 CXCR3P49682 368 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 ATXN1P54253 815 aaKnown RBP11.3□□□□□ -0.6
SPG11-216ENST00000559347 GSCP56915 257 aaPredicted RBP11.3□□□□□ -0.6
SPG11-216ENST00000559347 DEUP1Q05D60 604 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 PTP4A2Q12974 167 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 AUHQ13825 339 aaKnown RBP11.3□□□□□ -0.6
SPG11-216ENST00000559347 CLEC16AQ2KHT3 1053 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms