RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ARHGAP36Q6ZRI8 547 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 PID1Q7Z2X4 250 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 BBS7Q8IWZ6 715 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 TMA16Q96EY4 203 aaKnown RBP10.5□□□□□ -0.73
NEK9-205ENST00000555405 MYRFLQ96LU7 910 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 ZNF670Q9BS34 389 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 ADAM7Q9H2U9 754 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 DTLQ9NZJ0 730 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 DPP7Q9UHL4 492 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 AGO1Q9UL18 857 aaKnown RBP10.5□□□□□ -0.73
NEK9-205ENST00000555405 WNT6Q9Y6F9 365 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 PLXNA4Q9HCM2 1894 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 FAM92AA1XBS5 289 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 H0Y626 953 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 APOC4-APOC2K7ER74 178 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 TBL1XO60907 577 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 APOC2P02655 101 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 PPP2R5DQ14738 602 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 SIX1Q15475 284 aaPredicted RBP10.49□□□□□ -0.73
NEK9-205ENST00000555405 CCNG2Q16589 344 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 DUSP6Q16828 381 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 NCBP2-AS2Q69YL0 99 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 HEATR6Q6AI08 1181 aaKnown RBP10.49□□□□□ -0.73
NEK9-205ENST00000555405 RNF135Q8IUD6 432 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 MMGT1Q8N4V1 131 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 NPWQ8N729 165 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 TTC13Q8NBP0 860 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 NSUN3Q9H649 340 aaKnown RBP10.49□□□□□ -0.73
NEK9-205ENST00000555405 REV3LO60673 3130 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 MYOFQ9NZM1 2061 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 TSC2P49815 1807 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 LEFTY2O00292 366 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 PRAMEF12O95522 483 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 JCHAINP01591 159 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 ZDHHC11BP0C7U3 371 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 SLC6A4P31645 630 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 PPARDQ03181 441 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 CALCOCO2Q13137 446 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 PPP2R5EQ16537 467 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 TRIM68Q6AZZ1 485 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 TMC8Q8IU68 726 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 GPR161Q8N6U8 529 aaKnown RBP10.49□□□□□ -0.73
NEK9-205ENST00000555405 ZSCAN18Q8TBC5 510 aaPredicted RBP10.49□□□□□ -0.73
NEK9-205ENST00000555405 CATSPERBQ9H7T0 1116 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 ZNF638Q14966 1978 aaKnown RBP10.49□□□□□ -0.73
NEK9-205ENST00000555405 ATG2BQ96BY7 2078 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 CES2O00748 559 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 MYBL2P10244 700 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 SGSHP51688 502 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 KLF1Q13351 362 aaPredicted RBP10.49□□□□□ -0.73
NEK9-205ENST00000555405 SMYD5Q6GMV2 418 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 NADSYN1Q6IA69 706 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 CES5AQ6NT32 575 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 MSANTD2Q6P1R3 559 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 CCDC117Q8IWD4 279 aaPredicted RBP10.49□□□□□ -0.73
NEK9-205ENST00000555405 SCML4Q8N228 414 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 TDRD5Q8NAT2 981 aaKnown RBP10.49□□□□□ -0.73
NEK9-205ENST00000555405 OR7D4Q8NG98 312 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 CASKIN2Q8WXE0 1202 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 NTAN1Q96AB6 310 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 CDK5RAP1Q96SZ6 601 aaKnown RBP10.49□□□□□ -0.73
NEK9-205ENST00000555405 MUC3BQ9H195 1237 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 TDP1Q9NUW8 608 aa10.49□□□□□ -0.73
NEK9-205ENST00000555405 KLHL8Q9P2G9 620 aaPredicted RBP10.49□□□□□ -0.73
NEK9-205ENST00000555405 TTC24A2A3L6 582 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 E7EVH7 732 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 OAS1P00973 400 aaKnown RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 P3H1Q32P28 736 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 ATAT1Q5SQI0 421 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 IFT20Q8IY31 132 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 CMTM8Q8IZV2 173 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 ZNF707Q96C28 371 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 PGAP3Q96FM1 320 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 TRMT2BQ96GJ1 504 aaKnown RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 SLC39A13Q96H72 371 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 TTYH1Q9H313 450 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 HBS1LQ9Y450 684 aaKnown RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 ACTL7AQ9Y615 435 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 TYW5A2RUC4 315 aaKnown RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 CBX4O00257 560 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 SOX1O00570 391 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 ZFXP17010 805 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 KCNA5P22460 613 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 FSHRP23945 695 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 KPNA1P52294 538 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 ZNF177Q13360 481 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 ADGRE1Q14246 886 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 PDE12Q6L8Q7 609 aaKnown RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 TFB1MQ8WVM0 346 aaKnown RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 MYLIPQ8WY64 445 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 HAPLN3Q96S86 360 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 KLF16Q9BXK1 252 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 ZYG11BQ9C0D3 744 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 SLC39A8Q9C0K1 460 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 TASP1Q9H6P5 420 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 RAB6BQ9NRW1 208 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 ARHGEF38Q9NXL2 777 aa10.48□□□□□ -0.73
NEK9-205ENST00000555405 FEZ2Q9UHY8 353 aaPredicted RBP10.48□□□□□ -0.73
NEK9-205ENST00000555405 ZNF197O14709 1029 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms