RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 MRFAP1Q9Y605 127 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 ZFP37Q9Y6Q3 630 aaPredicted RBP10.07□□□□□ -0.8
CHD8-204ENST00000553622 ATG2BQ96BY7 2078 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 PDE2AO00408 941 aaPredicted RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 FGF10O15520 208 aaPredicted RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 GREM1O60565 184 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 CNTN5O94779 1100 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 MAP3K6O95382 1288 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 CYBBP04839 570 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 ZFXP17010 805 aaPredicted RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 ERCC2P18074 760 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 IL4RP24394 825 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 HTR7P34969 479 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 PTPN7P35236 360 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 CHKAP35790 457 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 SGSHP51688 502 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 ZNF135P52742 658 aaPredicted RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 NRG1Q02297 640 aaPredicted RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 C2orf54Q08AI8 447 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 SNX1Q13596 522 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 DPYSQ14117 519 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 GRM2Q14416 872 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 ANO4Q32M45 955 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 ALFQ53S48 1182 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 ACBD5Q5T8D3 534 aaPredicted RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 TANGO2Q6ICL3 276 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 PTCRAQ6ISU1 281 aaPredicted RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 NPNTQ6UXI9 565 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 MTSS1LQ765P7 747 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 ZNF354CQ86Y25 554 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 CCDC117Q8IWD4 279 aaPredicted RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 RASGEF1CQ8N431 466 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 CARNMT1Q8N4J0 409 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 PQLC3Q8N755 202 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 HJURPQ8NCD3 748 aaPredicted RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 MNS1Q8NEH6 495 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 FAM71BQ8TC56 605 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 ACTRT1Q8TDG2 376 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 MAIP1Q8WWC4 291 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 TMA16Q96EY4 203 aaKnown RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 MYEOVQ96EZ4 313 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 CELF6Q96J87 481 aaKnown RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 ZFYVE19Q96K21 471 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 RPGRIP1Q96KN7 1286 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 PRICKLE1Q96MT3 831 aaPredicted RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 LINC00597Q9H2U6 94 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 THG1LQ9NWX6 298 aaKnown RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 PLK2Q9NYY3 685 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 TBC1D14Q9P2M4 693 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 SAE1Q9UBE0 346 aaPredicted RBP10.06□□□□□ -0.8
CHD8-204ENST00000553622 C5orf42Q9H799 3197 aa10.06□□□□□ -0.8
CHD8-204ENST00000553622 ANKRD36A6QL64 1941 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 KIAA1549LQ6ZVL6 1849 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.05□□□□□ -0.8
CHD8-204ENST00000553622 ZNF487B1APH4 448 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 NEDD8-MDP1E9PL57 170 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 H0Y626 953 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 DFFAO00273 331 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 MFSD11O43934 449 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 PECAM1P16284 738 aaPredicted RBP10.05□□□□□ -0.8
CHD8-204ENST00000553622 RHOQP17081 205 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 TGM2P21980 687 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 FCARP24071 287 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 WEE1P30291 646 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 OR1E1P30953 314 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 HCAR3P49019 387 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 NUMBP49757 651 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 TFF2Q03403 129 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 ADCY2Q08462 1091 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 ZNF177Q13360 481 aaPredicted RBP10.05□□□□□ -0.8
CHD8-204ENST00000553622 TAZQ16635 292 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 MANEALQ5VSG8 457 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 NCBP2-AS2Q69YL0 99 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 TRIM68Q6AZZ1 485 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 PARM1Q6UWI2 310 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 VITQ6UXI7 678 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 BBS12Q6ZW61 710 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 VSIG1Q86XK7 387 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 KLHL7Q8IXQ5 586 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 ZNF683Q8IZ20 524 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 RTL3Q8N8U3 475 aaKnown RBP10.05□□□□□ -0.8
CHD8-204ENST00000553622 C1orf54Q8WWF1 131 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 ATG4AQ8WYN0 398 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 P3H4Q92791 437 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 E2F7Q96AV8 911 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 FAF2Q96CS3 445 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 LRRC3BQ96PB8 259 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 CARD6Q9BX69 1037 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 BBS2Q9BXC9 721 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 PLA2G2FQ9BZM2 168 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 PRDM6Q9NQX0 595 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 ETNK2Q9NVF9 386 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 PPARGC1AQ9UBK2 798 aaKnown RBP10.05□□□□□ -0.8
CHD8-204ENST00000553622 RNF14Q9UBS8 474 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 R3HDM2Q9Y2K5 976 aaKnown RBP10.05□□□□□ -0.8
CHD8-204ENST00000553622 NR2E1Q9Y466 385 aa10.05□□□□□ -0.8
CHD8-204ENST00000553622 IGLV3-10A0A075B6K4 115 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 A0A1B0GVM2 712 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 CTAGE15A4D2H0 777 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms