RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CDH2P19022 906 aaPredicted RBP14.56□□□□□ -0.08
SRP54-202ENST00000546080 GLDCP23378 1020 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 CYP2F1P24903 491 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 GMPRP36959 345 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 MAGEA8P43361 318 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 EFNA5P52803 228 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 OSTNP61366 133 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 CCDC14Q49A88 953 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 PIGGQ5H8A4 983 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 PPM1LQ5SGD2 360 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 HEATR6Q6AI08 1181 aaKnown RBP14.56□□□□□ -0.08
SRP54-202ENST00000546080 MAPK15Q8TD08 544 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 KBTBD7Q8WVZ9 684 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 NLRP7Q8WX94 980 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 ATG4CQ96DT6 458 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 FERMT1Q9BQL6 677 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 HAUS8Q9BT25 410 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 VPS33BQ9H267 617 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 RPAP3Q9H6T3 665 aaPredicted RBP14.56□□□□□ -0.08
SRP54-202ENST00000546080 MORF4L1Q9UBU8 362 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 GOLGA8QA0A0J9YX86 632 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 GOLGA8OA6NCC3 632 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 SPDYE16A6NNV3 312 aaPredicted RBP14.55□□□□□ -0.08
SRP54-202ENST00000546080 SPATA31C2B4DYI2 1134 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 GOLGA8NF8WBI6 632 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 VWA5AO00534 786 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 CFLARO15519 480 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 PRKCBP05771 671 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 PGAM1P18669 254 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 MSX2P35548 267 aaPredicted RBP14.55□□□□□ -0.08
SRP54-202ENST00000546080 SESN2P58004 480 aaPredicted RBP14.55□□□□□ -0.08
SRP54-202ENST00000546080 CREB5Q02930 508 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 RSBN1LQ6PCB5 846 aaPredicted RBP14.55□□□□□ -0.08
SRP54-202ENST00000546080 TNS4Q8IZW8 715 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 PGBD4Q96DM1 585 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 WNK4Q96J92 1243 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 HEXIM2Q96MH2 286 aaKnown RBP14.55□□□□□ -0.08
SRP54-202ENST00000546080 NIFKQ9BYG3 293 aaKnown RBP14.55□□□□□ -0.08
SRP54-202ENST00000546080 RSL24D1Q9UHA3 163 aaKnown RBP14.55□□□□□ -0.08
SRP54-202ENST00000546080 VPS28Q9UK41 221 aa14.55□□□□□ -0.08
SRP54-202ENST00000546080 PRSS51A0A1B0GVH4 220 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 TMEM114B3SHH9 223 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 GPR25O00155 361 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 CILPO75339 1184 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 MMP10P09238 476 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 MLNP12872 115 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 ENO3P13929 434 aaPredicted RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 MGAT1P26572 445 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 TCF7P36402 384 aaPredicted RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 NUMBP49757 651 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 ATXN3P54252 364 aaPredicted RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 PKNOX1P55347 436 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 GBE1Q04446 702 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 LPIN1Q14693 890 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 CYTH1Q15438 398 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 ZNF554Q86TJ5 538 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 TRIML2Q8N7C3 387 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 RP9Q8TA86 221 aaKnown RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 USP13Q92995 863 aaPredicted RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 QKIQ96PU8 341 aaKnown RBP eCLIP14.54□□□□□ -0.084e-9■■■■■ 35.8
SRP54-202ENST00000546080 PHF12Q96QT6 1004 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 TBCBQ99426 244 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 CCT7Q99832 543 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 SLC2A11Q9BYW1 496 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 SNX15Q9NRS6 342 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 PIH1D1Q9NWS0 290 aaKnown RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 KPNA7A9QM74 516 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 NOP56O00567 594 aaKnown RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 NEMP1O14524 444 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 B4GALT4O60513 344 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 DGKIO75912 1065 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 VDRP11473 427 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 CD1EP15812 388 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 ME2P23368 584 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 GP5P40197 560 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 SP2Q02086 613 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 SFSWAPQ12872 951 aaKnown RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 PDK1Q15118 436 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 BSPRYQ5W0U4 402 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 SNRNP48Q6IEG0 339 aaKnown RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 KCNT2Q6UVM3 1135 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 NAPRTQ6XQN6 538 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 CMC1Q7Z7K0 106 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 SETD3Q86TU7 594 aaPredicted RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 FAM83AQ86UY5 434 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 ERI1Q8IV48 349 aaKnown RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 ZBTB8OSQ8IWT0 167 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 PGAM4Q8N0Y7 254 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 TSPAN14Q8NG11 270 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 PDCD6IPQ8WUM4 868 aaKnown RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 RCN3Q96D15 328 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 CNDP1Q96KN2 507 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 PPP1R36Q96LQ0 422 aa14.54□□□□□ -0.08
SRP54-202ENST00000546080 ZBTB12Q9Y330 459 aaPredicted RBP14.54□□□□□ -0.08
SRP54-202ENST00000546080 DPYSL4O14531 572 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 MDM4O15151 490 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 TOMM70O94826 608 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 P4HA1P13674 534 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 ZFXP17010 805 aaPredicted RBP14.53□□□□□ -0.08
SRP54-202ENST00000546080 SDC4P31431 198 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms