RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ZNF479Q96JC4 524 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 SPAG4Q9NPE6 437 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 CEP83Q9Y592 693 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 PCDHGB2Q9Y5G2 931 aa5.32□□□□□ -1.56
SNHG1-224ENST00000545688 LOC105369274A0A096LPK9 316 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 LOC102723532A0A0G2JNH3 316 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 GLP2RO95838 553 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 IZUMO3Q5VZ72 239 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 ARL6IP4Q66PJ3 421 aaKnown RBP5.31□□□□□ -1.56
SNHG1-224ENST00000545688 HMBOX1Q6NT76 420 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 KSR2Q6VAB6 950 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 OR4N4Q8N0Y3 316 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 EXD3Q8N9H8 876 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 IPO4Q8TEX9 1081 aaKnown RBP5.31□□□□□ -1.56
SNHG1-224ENST00000545688 LPAR1Q92633 364 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 CENPIQ92674 756 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-224ENST00000545688 KAT2AQ92830 837 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 CLMNQ96JQ2 1002 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 ZPBPQ9BS86 351 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 RBM38Q9H0Z9 239 aaKnown RBP5.31□□□□□ -1.56
SNHG1-224ENST00000545688 CERS4Q9HA82 394 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 TM7SF3Q9NS93 570 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 CUX2O14529 1486 aa5.31□□□□□ -1.56
SNHG1-224ENST00000545688 ANO9A1A5B4 782 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 TNFRSF13BO14836 293 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-224ENST00000545688 HNRNPDLO14979 420 aaKnown RBP5.3□□□□□ -1.56
SNHG1-224ENST00000545688 SPTLC2O15270 562 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 NFATC1O95644 943 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 ANXA6P08133 673 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 NGFRP08138 427 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 KLRK1P26718 216 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 TAS2R50P59544 299 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 ZNF585BQ52M93 769 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 DGKKQ5KSL6 1271 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 CYB5R4Q7L1T6 521 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 C11orf96Q7Z7L8 435 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 ADPRHL1Q8NDY3 354 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 KIAA1191Q96A73 305 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 MYLK2Q9H1R3 596 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 SLC52A1Q9NWF4 448 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 LMTK3Q96Q04 1460 aa5.3□□□□□ -1.56
SNHG1-224ENST00000545688 PRR23D1E9PI22 279 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-224ENST00000545688 RPP40O75818 363 aaKnown RBP5.29□□□□□ -1.56
SNHG1-224ENST00000545688 IFNA2P01563 188 aa5.29□□□□□ -1.56
SNHG1-224ENST00000545688 ALDOAP04075 364 aaKnown RBP5.29□□□□□ -1.56
SNHG1-224ENST00000545688 ALDOCP09972 364 aaKnown RBP5.29□□□□□ -1.56
SNHG1-224ENST00000545688 PRR23D2P0DMB1 279 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-224ENST00000545688 PLA2G2AP14555 144 aa5.29□□□□□ -1.56
SNHG1-224ENST00000545688 IGFBP2P18065 325 aa5.29□□□□□ -1.56
SNHG1-224ENST00000545688 TTC39AQ5SRH9 613 aa5.29□□□□□ -1.56
SNHG1-224ENST00000545688 TRABD2AQ86V40 505 aa5.29□□□□□ -1.56
SNHG1-224ENST00000545688 INPP5DQ92835 1189 aa5.29□□□□□ -1.56
SNHG1-224ENST00000545688 CCDC138Q96M89 665 aa5.29□□□□□ -1.56
SNHG1-224ENST00000545688 TMEM204Q9BSN7 226 aa5.29□□□□□ -1.56
SNHG1-224ENST00000545688 OSBPL5Q9H0X9 879 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-224ENST00000545688 SFXN1Q9H9B4 322 aa5.29□□□□□ -1.56
SNHG1-224ENST00000545688 IL21RQ9HBE5 538 aa5.29□□□□□ -1.56
SNHG1-224ENST00000545688 RAB21Q9UL25 225 aa5.29□□□□□ -1.56
SNHG1-224ENST00000545688 SLC39A10Q9ULF5 831 aa5.29□□□□□ -1.56
SNHG1-224ENST00000545688 CXorf65A6NEN9 183 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 FOXO6A8MYZ6 492 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 PIP5K1BO14986 540 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 MDM4O15151 490 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 PLA2G6O60733 806 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 NPPBP16860 134 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 HOXA11P31270 313 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-224ENST00000545688 GNALP38405 381 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 FOXL2P58012 376 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 FAM3BP58499 235 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-224ENST00000545688 RPL15P61313 204 aaKnown RBP5.28□□□□□ -1.56
SNHG1-224ENST00000545688 ZXDBP98169 803 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 TLE3Q04726 772 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 HLTFQ14527 1009 aaKnown RBP eCLIP5.28□□□□□ -1.56
SNHG1-224ENST00000545688 GPSM1Q86YR5 675 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 OIT3Q8WWZ8 545 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 MIB2Q96AX9 1013 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 REXO5Q96IC2 774 aaKnown RBP5.28□□□□□ -1.56
SNHG1-224ENST00000545688 CTAGE1Q96RT6 745 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 STK33Q9BYT3 514 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 TASP1Q9H6P5 420 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 MAP6D1Q9H9H5 199 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 FNIP2Q9P278 1114 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 IGSF9Q9P2J2 1179 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 TRPC5Q9UL62 973 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-224ENST00000545688 PHTF1Q9UMS5 762 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 PROCRQ9UNN8 238 aa5.28□□□□□ -1.56
SNHG1-224ENST00000545688 C3orf70A6NLC5 250 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-224ENST00000545688 C4orf47A7E2U8 309 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 SLC28A2O43868 658 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 NBPF7P0C2Y1 421 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-224ENST00000545688 AKT1P31749 480 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 AK2P54819 239 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 ALDH18A1P54886 795 aaKnown RBP5.27□□□□□ -1.57
SNHG1-224ENST00000545688 RINT1Q6NUQ1 792 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 MDGA2Q7Z553 956 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 ADHFE1Q8IWW8 467 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 FBXL14Q8N1E6 418 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 RBMXL3Q8N7X1 1067 aaKnown RBP5.27□□□□□ -1.57
SNHG1-224ENST00000545688 SMRP1Q8NCR6 262 aa5.27□□□□□ -1.57
SNHG1-224ENST00000545688 ATP2A3Q93084 1043 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms