RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 KIAA1522Q9P206 1035 aaPredicted RBP19.38■□□□□ 0.69
VPS33A-205ENST00000541169 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.37■□□□□ 0.69
VPS33A-205ENST00000541169 DRGXA6NNA5 263 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 CHURC1-FNTBB4DL54 471 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 H0Y626 953 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 MOCS3O95396 460 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 SLC6A11P48066 632 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 ZNF177Q13360 481 aaPredicted RBP19.37■□□□□ 0.69
VPS33A-205ENST00000541169 FZD5Q13467 585 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 SETD3Q86TU7 594 aaPredicted RBP19.37■□□□□ 0.69
VPS33A-205ENST00000541169 C12orf40Q86WS4 652 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 SPEM1Q8N4L4 309 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 BHMTQ93088 406 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 ACDQ96AP0 544 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 ARHGEF26Q96DR7 871 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 EPAS1Q99814 870 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 PACSIN1Q9BY11 444 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 ZYG11BQ9C0D3 744 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 DLGAP2Q9P1A6 1054 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 VANGL2Q9ULK5 521 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 FZD10Q9ULW2 581 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 USP18Q9UMW8 372 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 MTF2Q9Y483 593 aaPredicted RBP19.37■□□□□ 0.69
VPS33A-205ENST00000541169 TRIOO75962 3097 aa19.37■□□□□ 0.69
VPS33A-205ENST00000541169 FAM86C2PA6NEL3 165 aa19.36■□□□□ 0.69
VPS33A-205ENST00000541169 BTNL10A8MVZ5 291 aa19.36■□□□□ 0.69
VPS33A-205ENST00000541169 E9PAM4 449 aa19.36■□□□□ 0.69
VPS33A-205ENST00000541169 ARHGAP6O43182 974 aa19.36■□□□□ 0.69
VPS33A-205ENST00000541169 LRCH4O75427 683 aa19.36■□□□□ 0.69
VPS33A-205ENST00000541169 PROSCO94903 275 aa19.36■□□□□ 0.69
VPS33A-205ENST00000541169 SLC1A1P43005 524 aa19.36■□□□□ 0.69
VPS33A-205ENST00000541169 ATXN1P54253 815 aaKnown RBP19.36■□□□□ 0.69
VPS33A-205ENST00000541169 RPS24P62847 133 aaKnown RBP19.36■□□□□ 0.69
VPS33A-205ENST00000541169 ZNF252P-AS1Q0IIN9 211 aa19.36■□□□□ 0.69
VPS33A-205ENST00000541169 ZNF783Q6ZMS7 281 aa19.36■□□□□ 0.69
VPS33A-205ENST00000541169 KIAA0907Q7Z7F0 614 aaPredicted RBP19.36■□□□□ 0.69
VPS33A-205ENST00000541169 TMEM139Q8IV31 216 aa19.36■□□□□ 0.69
VPS33A-205ENST00000541169 TEKT4Q8WW24 435 aa19.36■□□□□ 0.69
VPS33A-205ENST00000541169 TBC1D30Q9Y2I9 924 aa19.36■□□□□ 0.69
VPS33A-205ENST00000541169 K7EQS6 105 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 FGF10O15520 208 aaPredicted RBP19.35■□□□□ 0.69
VPS33A-205ENST00000541169 EGFP01133 1207 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 ATP5BP06576 529 aaKnown RBP19.35■□□□□ 0.69
VPS33A-205ENST00000541169 MIPP30301 263 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 ETFBP38117 255 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 CCR3P51677 355 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 KDSRQ06136 332 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 C6orf118Q5T5N4 469 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 LRRC8AQ8IWT6 810 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 ZNF683Q8IZ20 524 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 CCAR2Q8N163 923 aaKnown RBP19.35■□□□□ 0.69
VPS33A-205ENST00000541169 CARNMT1Q8N4J0 409 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 CCDC185Q8N715 623 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 UBE2Q2Q8WVN8 375 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 FBRSL1Q9HCM7 1045 aaKnown RBP19.35■□□□□ 0.69
VPS33A-205ENST00000541169 ANLNQ9NQW6 1124 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 STIM2Q9P246 746 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 GGA2Q9UJY4 613 aa19.35■□□□□ 0.69
VPS33A-205ENST00000541169 I6L893 689 aaPredicted RBP19.34■□□□□ 0.69
VPS33A-205ENST00000541169 PI15O43692 258 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 SRGAP2O75044 1071 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 DCNP07585 359 aaKnown RBP19.34■□□□□ 0.69
VPS33A-205ENST00000541169 KRT7P08729 469 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 PABPC1P11940 636 aaKnown RBP19.34■□□□□ 0.69
VPS33A-205ENST00000541169 HNRNPLP14866 589 aaKnown RBP eCLIP19.34■□□□□ 0.69
VPS33A-205ENST00000541169 HCAR3P49019 387 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 SGSHP51688 502 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 VAV2P52735 878 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 PLK1P53350 603 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 SULT2A1Q06520 285 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 IFI16Q16666 785 aaKnown RBP19.34■□□□□ 0.69
VPS33A-205ENST00000541169 MANEALQ5VSG8 457 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 SDE2Q6IQ49 451 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 RAD9BQ6WBX8 426 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 CFAP52Q8N1V2 620 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 TMEM105Q8N8V8 129 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 DTWD2Q8NBA8 298 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 IGSF8Q969P0 613 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 TBC1D31Q96DN5 1066 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 TRIM7Q9C029 511 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 IRF2BPLQ9H1B7 796 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 CATSPERBQ9H7T0 1116 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 ABCB8Q9NUT2 735 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 AP4E1Q9UPM8 1137 aa19.34■□□□□ 0.69
VPS33A-205ENST00000541169 CXorf51AA0A1B0GTR3 108 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 RNF40O75150 1001 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 PAPSS2O95340 614 aaPredicted RBP19.33■□□□□ 0.68
VPS33A-205ENST00000541169 ASLP04424 464 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 RHOQP17081 205 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 HLA-FP30511 346 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 HOXC13P31276 330 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 MAPKAPK2P49137 400 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 KIF5AQ12840 1032 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 POLNQ7Z5Q5 900 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 KIAA1328Q86T90 577 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 ARFGAP1Q8N6T3 406 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 KDM1BQ8NB78 822 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 USP33Q8TEY7 942 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 ZWILCHQ9H900 591 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 OSGEPQ9NPF4 335 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms