RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 PRDM12Q9H4Q4 367 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 C11orf49Q9H6J7 331 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 CWH43Q9H720 699 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 ETNK1Q9HBU6 452 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 TMEM39AQ9NV64 488 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.54□□□□□ -1.04
C2CD3-215ENST00000540452 UXTQ9UBK9 157 aaPredicted RBP8.54□□□□□ -1.04
C2CD3-215ENST00000540452 NEU3Q9UQ49 428 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 AAR2Q9Y312 384 aaKnown RBP8.54□□□□□ -1.04
C2CD3-215ENST00000540452 KIAA1671Q9BY89 1806 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 IQANK1A0A1B0GTG1 560 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 RNF103O00237 685 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 AP2A1O95782 977 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 APRTP07741 180 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 VAV1P15498 845 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 RHOQP17081 205 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 MAPKAPK2P49137 400 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 SERPINB9P50453 376 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 YBEYP58557 167 aaPredicted RBP8.53□□□□□ -1.04
C2CD3-215ENST00000540452 GPX6P59796 221 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 GNGT1P63211 74 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 WASHC5Q12768 1159 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 PLD1Q13393 1074 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 BTG3Q14201 252 aaPredicted RBP8.53□□□□□ -1.04
C2CD3-215ENST00000540452 SLC14A2Q15849 920 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 PSMD5Q16401 504 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 TEX44Q53QW1 395 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 FNBP1LQ5T0N5 605 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 ANKRD22Q5VYY1 191 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 LRRC31Q6UY01 552 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 C3orf62Q6ZUJ4 267 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 NECAB2Q7Z6G3 386 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 DDX53Q86TM3 631 aaKnown RBP8.53□□□□□ -1.04
C2CD3-215ENST00000540452 LINC00523Q86TU6 105 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 TRABD2AQ86V40 505 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 SCN4BQ8IWT1 228 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 CCDC13Q8IYE1 715 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 SLC39A11Q8N1S5 342 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 UMODL1-AS1Q8N2C9 162 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 SH2D3CQ8N5H7 860 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 RTL3Q8N8U3 475 aaKnown RBP8.53□□□□□ -1.04
C2CD3-215ENST00000540452 COLGALT1Q8NBJ5 622 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 STKLD1Q8NE28 680 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 FBXO36Q8NEA4 188 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 SCAMP5Q8TAC9 235 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 ZNF461Q8TAF7 563 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 GSDMBQ8TAX9 411 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 EPS8L3Q8TE67 593 aaKnown RBP8.53□□□□□ -1.04
C2CD3-215ENST00000540452 PTCD2Q8WV60 388 aaKnown RBP8.53□□□□□ -1.04
C2CD3-215ENST00000540452 SLC44A1Q8WWI5 657 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 NDRG1Q92597 394 aaKnown RBP8.53□□□□□ -1.04
C2CD3-215ENST00000540452 EDEM1Q92611 657 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 CASP10Q92851 521 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 FBXO32Q969P5 355 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 TTC17Q96AE7 1141 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 PLD4Q96BZ4 506 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 SCLYQ96I15 445 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 FCRL2Q96LA5 508 aaPredicted RBP8.53□□□□□ -1.04
C2CD3-215ENST00000540452 C9orf72Q96LT7 481 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 EBNA1BP2Q99848 306 aaKnown RBP8.53□□□□□ -1.04
C2CD3-215ENST00000540452 RHOBTB2Q9BYZ6 727 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 FAM107BQ9H098 131 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 VPS37BQ9H9H4 285 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 INTS9Q9NV88 658 aaKnown RBP8.53□□□□□ -1.04
C2CD3-215ENST00000540452 TMEM248Q9NWD8 314 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 MKS1Q9NXB0 559 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 BCCIPQ9P287 314 aaKnown RBP eCLIP8.53□□□□□ -1.04
C2CD3-215ENST00000540452 RABGEF1Q9UJ41 708 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 ASB3Q9Y575 518 aa8.53□□□□□ -1.04
C2CD3-215ENST00000540452 CXorf51AA0A1B0GTR3 108 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 A0A1W2PQH9 124 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 TLDC2A0PJX2 215 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 SDR42E2A6NKP2 422 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 DRGXA6NNA5 263 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 E9PAM4 449 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 F8W810 466 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 FAM72CH0Y354 149 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 I6L893 689 aaPredicted RBP8.52□□□□□ -1.05
C2CD3-215ENST00000540452 TM9SF1O15321 606 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 PAGE1O75459 146 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 ANXA9O76027 345 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 ALDH1A2O94788 518 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 ZWINTO95229 277 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 SRGAP2BP0DMP2 458 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 PTPN3P26045 913 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 HPDP32754 393 aaPredicted RBP8.52□□□□□ -1.05
C2CD3-215ENST00000540452 NPY2RP49146 381 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 GYS2P54840 703 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 CCL23P55773 120 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 TBX4P57082 545 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 AP1B1Q10567 949 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 RAB33AQ14088 237 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 HNRNPDQ14103 355 aaKnown RBP8.52□□□□□ -1.05
C2CD3-215ENST00000540452 PRPSAP1Q14558 356 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 DBN1Q16643 649 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 ZSCAN26Q16670 478 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 LONRF1Q17RB8 773 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 BBS9Q3SYG4 887 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 PARP15Q460N3 678 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 RTP2Q5QGT7 225 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms