RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 HTR3DQ70Z44 454 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 B4GALNT4Q76KP1 1039 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 NLRP14Q86W24 1093 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 JAMLQ86YT9 394 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 DENND1CQ8IV53 801 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 TP53INP2Q8IXH6 220 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 ALLCQ8N6M5 410 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 NETO2Q8NC67 525 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 ITFG1Q8TB96 612 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 CASKIN2Q8WXE0 1202 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 SMG7Q92540 1137 aaKnown RBP12.08□□□□□ -0.48
SPARC-207ENST00000537849 ZSWIM3Q96MP5 696 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 OLFM3Q96PB7 478 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 GCNAQ96QF7 691 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 ERP44Q9BS26 406 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 TRIM51Q9BSJ1 452 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 TTYH1Q9H313 450 aaPredicted RBP12.08□□□□□ -0.48
SPARC-207ENST00000537849 EPB41L5Q9HCM4 733 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 DZANK1Q9NVP4 752 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 SMPD4Q9NXE4 827 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 MPP6Q9NZW5 540 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 ZNF212Q9UDV6 495 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 VANGL2Q9ULK5 521 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 ZNF148Q9UQR1 794 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 COLQQ9Y215 455 aaPredicted RBP12.08□□□□□ -0.48
SPARC-207ENST00000537849 CPQQ9Y646 472 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 SHROOM3Q8TF72 1996 aa12.08□□□□□ -0.48
SPARC-207ENST00000537849 BCLAF3A2AJT9 711 aaKnown RBP12.07□□□□□ -0.48
SPARC-207ENST00000537849 ZSCAN5CA6NGD5 496 aaPredicted RBP12.07□□□□□ -0.48
SPARC-207ENST00000537849 MCF2LO15068 1137 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 FGF10O15520 208 aaPredicted RBP12.07□□□□□ -0.48
SPARC-207ENST00000537849 MFSD11O43934 449 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 HEXIM1O94992 359 aaKnown RBP12.07□□□□□ -0.48
SPARC-207ENST00000537849 MAP3K6O95382 1288 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 LATS1O95835 1130 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 IRF1P10914 325 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 RHOQP17081 205 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 POU3F3P20264 500 aaPredicted RBP12.07□□□□□ -0.48
SPARC-207ENST00000537849 SLC11A2P49281 568 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 GUCY2DQ02846 1103 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 LMNB2Q03252 620 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 ALFQ53S48 1182 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 ADGRF1Q5T601 910 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 AFMIDQ63HM1 303 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 RWDD4Q6NW29 188 aaKnown RBP12.07□□□□□ -0.48
SPARC-207ENST00000537849 DARS2Q6PI48 645 aaKnown RBP12.07□□□□□ -0.48
SPARC-207ENST00000537849 TMCO3Q6UWJ1 677 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 SYDE1Q6ZW31 735 aaPredicted RBP12.07□□□□□ -0.48
SPARC-207ENST00000537849 BZW1Q7L1Q6 419 aaKnown RBP12.07□□□□□ -0.48
SPARC-207ENST00000537849 GPR149Q86SP6 731 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 PRUNE1Q86TP1 453 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 ZC3H18Q86VM9 953 aaKnown RBP12.07□□□□□ -0.48
SPARC-207ENST00000537849 ARHGAP12Q8IWW6 846 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 CMTM8Q8IZV2 173 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 NPWQ8N729 165 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 GLIS1Q8NBF1 620 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 GRK7Q8WTQ7 553 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 LRRN4Q8WUT4 740 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 PPP2R3CQ969Q6 453 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 TMEM121Q9BTD3 319 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 ZYG11BQ9C0D3 744 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 PRDM12Q9H4Q4 367 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 NOL6Q9H6R4 1146 aaKnown RBP12.07□□□□□ -0.48
SPARC-207ENST00000537849 CATSPERBQ9H7T0 1116 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 SFXN1Q9H9B4 322 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 PIDD1Q9HB75 910 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 NDFIP2Q9NV92 336 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 ARHGAP26Q9UNA1 814 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 RAD54BQ9Y620 910 aa12.07□□□□□ -0.48
SPARC-207ENST00000537849 HACD1B0YJ81 288 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 H7C0C1 242 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 LEFTY2O00292 366 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 ECEL1O95672 775 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 KRT14P02533 472 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 CKMP06732 381 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 TUBBP07437 444 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 ZSCAN5DPP0CG00 497 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 ETS1P14921 441 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 CEBPBP17676 345 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 RBL1P28749 1068 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 WEE1P30291 646 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 STIP1P31948 543 aaKnown RBP12.06□□□□□ -0.48
SPARC-207ENST00000537849 ATP5OP48047 213 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 CARSP49589 748 aaKnown RBP12.06□□□□□ -0.48
SPARC-207ENST00000537849 VSNL1P62760 191 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 MLLT1Q03111 559 aaPredicted RBP12.06□□□□□ -0.48
SPARC-207ENST00000537849 PTK6Q13882 451 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 ADGRE1Q14246 886 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 GRIN2CQ14957 1233 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 ARHGAP15Q53QZ3 475 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 SLC45A4Q5BKX6 768 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 RARS2Q5T160 578 aaKnown RBP12.06□□□□□ -0.48
SPARC-207ENST00000537849 ANKRD54Q6NXT1 300 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 RFWD3Q6PCD5 774 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 CHSY1Q86X52 802 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 DDX42Q86XP3 938 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPARC-207ENST00000537849 FAM217AQ8IXS0 508 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 IFT20Q8IY31 132 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 LGI2Q8N0V4 545 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 UMODL1-AS1Q8N2C9 162 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms